WormBase Tree Display for Gene: WBGene00016585

WBGene00016585 SMap: S_parent: Sequence: C42C1
  Identity: Version: 2
    Name: CGC_name: oac-59 Person_evidence: WBPerson2553
            WBPerson567
      Sequence_name: C42C1.7
      Molecular_name: C42C1.7a
        C42C1.7a.1
        CE46875
        C42C1.7b
        CE44705
        C42C1.7b.1
      Other_name: CELE_C42C1.7 Accession_evidence: NDB BX284604
      Public_name: oac-59
    DB_info: Database: AceView gene 4N58
        WormQTL gene WBGene00016585
        WormFlux gene WBGene00016585
        NDB locus_tag CELE_C42C1.7
        Panther gene CAEEL|WormBase=WBGene00016585|UniProtKB=A3QMB6
          family PTHR23028
        NCBI gene 178180
        RefSeq protein NM_001268707.2
            NM_001268708.3
        TREEFAM TREEFAM_ID TF317622
        TrEMBL UniProtAcc D3TDG8
            A3QMB6
        UniProt_GCRP UniProtAcc A3QMB6
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 10 Sep 2008 16:37:04 WBPerson2970 Name_change: CGC_name: oac-59
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: oac
    Allele (110)
    Strain: WBStrain00050910
    RNASeq_FPKM (74)
    GO_annotation: 00004360
      00004361
      00122160
    Ortholog: WBGene00066267 Caenorhabditis remanei From_analysis: OMA
      WBGene00028577 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00041117 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00142888 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      WBGene00061402 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00061403 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00129436 Caenorhabditis japonica From_analysis: Inparanoid_8
      WBGene00095156 Pristionchus pacificus From_analysis: Inparanoid_8
      CSP26.g5369 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g11067 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g7765 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g7908 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g10998 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP39.g8607 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g22689 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cnig_chr_IV.g14208 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g12730 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00142.g5497 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_00187.g6573 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_04828 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_04829 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_18402 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_014281 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g05467 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g06595 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g06604 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g07669 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g12247 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g12273 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g13685 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g13725 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g13834 Panagrellus redivivus From_analysis: WormBase-Compara
      chrIV_pilon.g12045 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00085056 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00089653 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00091451 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00275373 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00278255 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00279402 Pristionchus pacificus From_analysis: WormBase-Compara
    Paralog (44)
    Structured_description: Automated_description: Predicted to enable acyltransferase activity, transferring groups other than amino-acyl groups. Predicted to be located in membrane. Expressed in amphid neurons and hypodermis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C42C1.7a
      C42C1.7b
    Corresponding_CDS_history: C42C1.7a:wp229
    Corresponding_transcript: C42C1.7a.1
      C42C1.7b.1
    Other_sequence: Tcir_isotig19199
    Associated_feature (19)
  Experimental_info: RNAi_result: WBRNAi00042346 Inferred_automatically: RNAi_primary
      WBRNAi00011864 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr9623
      Expr1012559
      Expr1146334
      Expr2014582
      Expr2032815
    Drives_construct: WBCnstr00014184
      WBCnstr00027962
    Construct_product: WBCnstr00027962
    Microarray_results (21)
    Expression_cluster (152)
    Interaction: WBInteraction000368613
      WBInteraction000371992
  Map_info: Map: IV Position: 5.83878 Error: 0.000965
    Positive: Positive_clone: C42C1 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene