WormBase Tree Display for Gene: WBGene00016513

WBGene00016513 SMap: S_parent: Sequence: C38C3
  Identity: Version: 1
    Name: Sequence_name: C38C3.4
      Molecular_name: C38C3.4b
        C38C3.4a
        CE50916
        C38C3.4b.1
      Other_name: CELE_C38C3.4 Accession_evidence: NDB BX284605
      Public_name: C38C3.4
    DB_info: Database (14)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (52)
    RNASeq_FPKM (74)
    GO_annotation: 00082467
      00082468
      00082469
      00082470
      00082471
      00122110
      00122111
      00122112
    Ortholog (41)
    Paralog (93)
    Structured_description: Automated_description: Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in signal transduction. Predicted to be located in nucleus. Human ortholog(s) of this gene implicated in spinocerebellar ataxia type 11. Is an ortholog of human TTBK1 (tau tubulin kinase 1) and TTBK2 (tau tubulin kinase 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0050961 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:19141)
  Molecular_info: Corresponding_CDS: C38C3.4b
    Corresponding_CDS_history: C38C3.4a:wp249
      C38C3.4b:wp249
    Corresponding_transcript: C38C3.4a
      C38C3.4b.1
    Other_sequence (22)
    Associated_feature: WBsf999338
      WBsf1019185
  Experimental_info: RNAi_result: WBRNAi00011743 Inferred_automatically: RNAi_primary
      WBRNAi00070636 Inferred_automatically: RNAi_primary
      WBRNAi00070638 Inferred_automatically: RNAi_primary
      WBRNAi00042140 Inferred_automatically: RNAi_primary
      WBRNAi00029653 Inferred_automatically: RNAi_primary
      WBRNAi00070637 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1027203
      Expr1146142
      Expr2001509
      Expr2019731
    Microarray_results (26)
    Expression_cluster: WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00038438:S.marcescens_24hr_downregulated_RNAseq
      WBPaper00038438:S.marcescens_24hr_downregulated_TilingArray
      WBPaper00042215:wdr-23(tm1817)_upregulated
      WBPaper00042561:smgl-2(RNAi)_upregulated
      WBPaper00044037:eat-2_upregulated
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00044743:wdr-23_neuron_upregulated
      WBPaper00045314:S.aureus-induced_N2
      WBPaper00045390:tunicamycin_downregulated
      WBPaper00045390:ubc-9(RNAi)_downregulated
      WBPaper00045521:Gender_Neutral
      WBPaper00045774:clk-1_upregulated
      WBPaper00045934:wrn-1(gk99)_downregulated
      WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
      WBPaper00047131:daf-2(e1370)_upregulated_N2-background
      WBPaper00049495:starvation-refeeding_regulated
      WBPaper00049942:HeatShock_downregulated_hsf-1(+)
      WBPaper00050053:muscle_enriched_Day4
      WBPaper00050053:muscle_enriched_Day12
      WBPaper00050370:dpy-21(e428)_L3_upregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050488:mir-34(OverExpression)_vs_N2_regulated_adult_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
      WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:starvation_regulated_LowSalt
      WBPaper00050801:DAF-12_dauer_regulome
      WBPaper00050801:DAF-16_dauer_regulome
      WBPaper00050801:DPY-21_dauer_regulome
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
      WBPaper00050990:GABAergic-neuron_enriched
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00052884:emb-4(hc60)_upregulated
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053388:dauer_regulated_Cluster2
      WBPaper00053664:ins-11(tm1053)_downregulated
      WBPaper00053810:daf-2(e1370)_upregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00055013:hmg-3(bar24)_upregulated
      WBPaper00055897:heat-shock_downregulated
      WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
      WBPaper00056090:E.faecalis_upregulated_N2
      WBPaper00056139:soil-microbiota_upregulated
      WBPaper00056218:daf-16(mu86)_upregulated_Day7
      WBPaper00056293:rpl-5(0)-rpl-33(0)_upregulated
      WBPaper00056471:S.aureus-4h_upregulated_N2
      WBPaper00056809:smn-1(ok355)_upregulated
      WBPaper00056826:hmc_biased
      WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
      WBPaper00057006:DietaryRestriction_upregulated
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00058711:paraquat_downregulated
      WBPaper00058725:sftb-1(cer6)_upregulated
      WBPaper00058948:PA14_downregulated
      WBPaper00058969:RIS_depleted
      WBPaper00059117:B.subtilis_upregulated
      WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
      WBPaper00059609:malt-1_ilc-17.1_nfki-1_upregulated
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00059739:hira-1(gk835598)_upregulated_L1
      WBPaper00059987:Wounding_upregulated
      WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060661:hypoxia_downregulated
      WBPaper00060661:sensory-neuron_depleted
      WBPaper00061274:hypergravity_15xg_downregulated
      WBPaper00061274:microgravity_downregulated
      WBPaper00061340:pm3_pm4_pm5
      WBPaper00061340:RIM
      WBPaper00061527:C32F10.4-D1086.2
      WBPaper00061995:mter-4(syb3662syb3403)_downregulated
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_enriched_coding-RNA
      WBPaper00062440:crh-1(n3315)_downregulated
      WBPaper00064005:starvation_upregulated_aptf-1(gk794)_mRNA
      WBPaper00064071:NHR-49_interacting
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00064107:lin-35(n745)_upregulated
      WBPaper00064156:lbp-3(overexpress)_upregulated
      WBPaper00064306:Agaro-oligosaccharides_upregulated
      WBPaper00064716:paraquat_downregulated
      WBPaper00064871:hypoxia_downregulated_F1
      WBPaper00064939:vit-5(RNAi)_upregulated
      WBPaper00065086:N2_N.ausubeli_regulated
      WBPaper00065841:4_0
      WBPaper00065841:4_1
      WBPaper00065841:4_2
      WBPaper00065841:7_0
      WBPaper00065841:7_1
      WBPaper00065841:7_2
      WBPaper00065841:24_0
      WBPaper00065841:24_1
      WBPaper00065841:26_0
      WBPaper00065841:26_1
      WBPaper00065841:26_2
      WBPaper00065841:38_0
      WBPaper00065841:38_2
      WBPaper00065841:143_0
      WBPaper00065975:P-body_vs_WholeAnimal_depleted
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066062:xrep-4(lax137)_upregulated
      cgc4489_group_12
      WBPaper00031003:0hr_muscle_enriched
      WBPaper00031003:24hr_muscle_enriched
      WBPaper00031003:total_muscle_enriched
      WBPaper00032948:StarveUp2
      WBPaper00034739:N2moreDR1350
      WBPaper00034757:up_by_oxidative_stress
      WBPaper00035227:heat_shock_regulated
      WBPaper00036286:Pattern_I
      WBPaper00038172:tax-6null_up_regulated
      WBPaper00039851:Live_C_albicans_vs_HK_OP50
      WBPaper00041002:HQ_3d_2.0mM_Up
      WBPaper00041174:environmental
      WBPaper00041174:genotypic
      WBPaper00041174:genotypic_and_environmental
      WBPaper00041207:CE_dauer_up
      WBPaper00041606:CE_S.marcescens_regulated
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_3h
      WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041960:N2_fasting_upregulated_anytime
      WBPaper00047070:N2_starvation_upregulated
      WBPaper00047070:xpa-1_UV_upregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053236:Starvation_regulated_N2
      WBPaper00057098:SiO2-nanoparticles_upregulated
      [cgc5376]:let-60(G12V)-regulated_genes
    Interaction: WBInteraction000007922
      WBInteraction000007923
      WBInteraction000111211
      WBInteraction000115919
      WBInteraction000116107
      WBInteraction000119742
      WBInteraction000127286
      WBInteraction000133518
      WBInteraction000133761
      WBInteraction000137202
      WBInteraction000137739
      WBInteraction000141342
      WBInteraction000142932
      WBInteraction000144431
      WBInteraction000150526
      WBInteraction000152876
      WBInteraction000153153
      WBInteraction000159540
      WBInteraction000171152
      WBInteraction000171770
      WBInteraction000177931
      WBInteraction000177950
      WBInteraction000179150
      WBInteraction000181222
      WBInteraction000181251
      WBInteraction000185011
      WBInteraction000193187
      WBInteraction000194464
      WBInteraction000196106
      WBInteraction000197395
      WBInteraction000202009
      WBInteraction000204609
      WBInteraction000206089
      WBInteraction000206864
      WBInteraction000209506
      WBInteraction000221419
      WBInteraction000222868
      WBInteraction000223139
      WBInteraction000224493
      WBInteraction000225821
      WBInteraction000232872
      WBInteraction000237974
      WBInteraction000241522
      WBInteraction000247947
      WBInteraction000248327
      WBInteraction000258515
      WBInteraction000258922
      WBInteraction000259726
      WBInteraction000260378
      WBInteraction000261045
      WBInteraction000264332
      WBInteraction000265266
      WBInteraction000265758
      WBInteraction000266698
      WBInteraction000266889
      WBInteraction000269267
      WBInteraction000269841
      WBInteraction000270078
      WBInteraction000272475
      WBInteraction000274452
      WBInteraction000274637
      WBInteraction000275020
      WBInteraction000279300
      WBInteraction000279729
      WBInteraction000281292
      WBInteraction000283904
      WBInteraction000288216
      WBInteraction000288233
      WBInteraction000291157
      WBInteraction000291496
      WBInteraction000294676
      WBInteraction000297528
      WBInteraction000300666
      WBInteraction000302352
      WBInteraction000303107
      WBInteraction000307220
      WBInteraction000309576
      WBInteraction000310636
      WBInteraction000313069
      WBInteraction000316838
      WBInteraction000317864
      WBInteraction000318876
      WBInteraction000323331
      WBInteraction000326132
      WBInteraction000331227
      WBInteraction000331727
      WBInteraction000332176
      WBInteraction000334157
      WBInteraction000334716
      WBInteraction000335793
      WBInteraction000337984
      WBInteraction000338206
      WBInteraction000339252
      WBInteraction000340285
      WBInteraction000340413
      WBInteraction000342778
      WBInteraction000343156
      WBInteraction000343849
      WBInteraction000344493
      WBInteraction000346345
      WBInteraction000347758
      WBInteraction000349520
      WBInteraction000350286
      WBInteraction000352834
      WBInteraction000359496
      WBInteraction000359900
      WBInteraction000370283
      WBInteraction000371810
      WBInteraction000371911
      WBInteraction000375421
      WBInteraction000377161
      WBInteraction000378311
      WBInteraction000380002
      WBInteraction000380706
      WBInteraction000381618
      WBInteraction000382237
      WBInteraction000385047
      WBInteraction000385425
      WBInteraction000385611
      WBInteraction000387262
      WBInteraction000390060
      WBInteraction000394893
      WBInteraction000397437
      WBInteraction000397866
      WBInteraction000403144
      WBInteraction000406173
      WBInteraction000409485
      WBInteraction000409486
      WBInteraction000410729
      WBInteraction000411064
      WBInteraction000417932
      WBInteraction000418432
      WBInteraction000422050
      WBInteraction000423256
      WBInteraction000427046
      WBInteraction000427762
      WBInteraction000427791
      WBInteraction000428711
      WBInteraction000434705
      WBInteraction000435619
      WBInteraction000436616
      WBInteraction000438298
      WBInteraction000439623
      WBInteraction000441137
      WBInteraction000441991
      WBInteraction000442334
      WBInteraction000442386
      WBInteraction000442550
      WBInteraction000443922
      WBInteraction000444347
      WBInteraction000444402
      WBInteraction000452354
      WBInteraction000453578
      WBInteraction000454393
      WBInteraction000459280
      WBInteraction000462306
      WBInteraction000567727
  Map_info: Positive: Positive_clone: C38C3 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V -18.8608
  Reference: WBPaper00027258
  Method: Gene