WormBase Tree Display for Gene: WBGene00016458
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| WBGene00016458 | SMap | S_parent | Sequence | C35E7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C35E7.6 | |||||||
| Molecular_name | C35E7.6 | ||||||||
| C35E7.6.1 | |||||||||
| CE17519 | |||||||||
| Other_name | CELE_C35E7.6 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | C35E7.6 | ||||||||
| DB_info | Database | AceView | gene | 1L395 | |||||
| WormQTL | gene | WBGene00016458 | |||||||
| WormFlux | gene | WBGene00016458 | |||||||
| NDB | locus_tag | CELE_C35E7.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016458|UniProtKB=O61770 | |||||||
| family | PTHR21504 | ||||||||
| NCBI | gene | 183243 | |||||||
| RefSeq | protein | NM_060428.3 | |||||||
| TREEFAM | TREEFAM_ID | TF319604 | |||||||
| TrEMBL | UniProtAcc | O61770 | |||||||
| UniProt_GCRP | UniProtAcc | O61770 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (42) | |||||||||
| Strain | WBStrain00036877 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00036265 | ||||||||
| 00122082 | |||||||||
| Ortholog (12) | |||||||||
| Paralog (12) | |||||||||
| Structured_description | Concise_description | C35E7.6 encodes a novel protein, conserved amongst nematodes, that is a member of the SEPA-1 family of proteins; C35E7.6 is selectively degraded by autophagy during embryonice development; C35E7.6 is weakly expressed in the embryo where it localizes diffusely to the cytoplasm; the 3'-UTR of C35E7.6 transcripts undergoes editing via adenosine deamination. | Paper_evidence | WBPaper00032118 | |||||
| WBPaper00032509 | |||||||||
| WBPaper00044827 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 12 Jan 2015 00:00:00 | ||||||||
| Automated_description | Predicted to be involved in autophagy. Located in cytoplasm. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C35E7.6 | |||||||
| Corresponding_transcript | C35E7.6.1 | ||||||||
| Associated_feature | WBsf985104 | ||||||||
| WBsf1010596 | |||||||||
| WBsf1010597 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00042007 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00029589 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00003093 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026217 | ||||||||
| Expr1037059 | |||||||||
| Expr1146015 | |||||||||
| Expr2001456 | |||||||||
| Expr2019679 | |||||||||
| Drives_construct | WBCnstr00006905 | ||||||||
| WBCnstr00028052 | |||||||||
| Construct_product | WBCnstr00006905 | ||||||||
| WBCnstr00028052 | |||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (100) | |||||||||
| Interaction | WBInteraction000503865 | ||||||||
| WBInteraction000504402 | |||||||||
| WBInteraction000504403 | |||||||||
| WBInteraction000504404 | |||||||||
| WBInteraction000522477 | |||||||||
| WBInteraction000522478 | |||||||||
| WBInteraction000522479 | |||||||||
| WBInteraction000539301 | |||||||||
| WBInteraction000539421 | |||||||||
| Map_info | Positive | Positive_clone | C35E7 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 5.25061 | |||||||
| Reference | WBPaper00032118 | ||||||||
| WBPaper00032509 | |||||||||
| WBPaper00039980 | |||||||||
| WBPaper00042170 | |||||||||
| Method | Gene |
