WormBase Tree Display for Gene: WBGene00016439

WBGene00016439 SMap: S_parent: Sequence: C35D10
  Identity: Version: 1
    Name: Sequence_name: C35D10.1
      Molecular_name: C35D10.1
        C35D10.1.1
        CE29951
      Other_name: CELE_C35D10.1 Accession_evidence: NDB BX284603
      Public_name: C35D10.1
    DB_info: Database: AceView gene 3F971
        WormQTL gene WBGene00016439
        WormFlux gene WBGene00016439
        NDB locus_tag CELE_C35D10.1
        Panther gene CAEEL|WormBase=WBGene00016439|UniProtKB=Q8WQG1
          family PTHR13605
        NCBI gene 175651
        RefSeq protein NM_001038264.5
        SwissProt UniProtAcc Q8WQG1
        TREEFAM TREEFAM_ID TF106158
        UniProt_GCRP UniProtAcc Q8WQG1
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (19)
    RNASeq_FPKM (74)
    GO_annotation: 00085252
      00085253
      00085254
    Contained_in_operon: CEOP3228
    Ortholog (34)
    Structured_description: Automated_description: Predicted to be located in membrane. Predicted to be part of EMC complex. Is an ortholog of human EMC7 (ER membrane protein complex subunit 7). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C35D10.1
    Corresponding_CDS_history: C35D10.1a:wp145
      C35D10.1b:wp145
    Corresponding_transcript: C35D10.1.1
    Other_sequence (38)
    Associated_feature: WBsf645131
      WBsf658875
      WBsf992238
      WBsf1014815
      WBsf224823
  Experimental_info: RNAi_result: WBRNAi00024741 Inferred_automatically: RNAi_primary
      WBRNAi00067457 Inferred_automatically: RNAi_primary
      WBRNAi00068063 Inferred_automatically: RNAi_primary
      WBRNAi00041979 Inferred_automatically: RNAi_primary
      WBRNAi00041982 Inferred_automatically: RNAi_primary
      WBRNAi00093008 Inferred_automatically: RNAi_primary
      WBRNAi00005644 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1026103
      Expr1037046
      Expr1145985
      Expr2001441
      Expr2019664
    Drives_construct: WBCnstr00028070
    Construct_product: WBCnstr00028070
    Microarray_results (22)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00032425:up_in_alg-1
      WBPaper00032528:L3_enriched
      WBPaper00036375:enriched_in_PVD_OLL
      WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:CEP-sheath-cells_adult_enriched
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:dopaminergic-neurons_larva_enriched
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:excretory-cell_larva_enriched
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:hypodermis_larva_enriched
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00038289:oocyte_protein
      WBPaper00041506:EMS_enriched
      WBPaper00041506:P3_enriched
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044501:gld-1_let-7_regulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045521:Gender_Neutral
      WBPaper00045571:germline-ablation_downregulated
      WBPaper00045974:NSM_enriched_DSN-treated_RNAseq
      WBPaper00045974:NSM_enriched_totalRNA_RNAseq
      WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
      WBPaper00048923:Aging_regulated
      WBPaper00048988:neuron_expressed
      WBPaper00049325:CB4856_vs_N2_DEG
      WBPaper00050053:muscle_enriched_Day4
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050686:glp-1(e2141)_upregulated
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:pharynx_expressed
      WBPaper00051039:germline_enriched
      WBPaper00053184:sma-2(rax5)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053810:daf-2(e1370)_downregulated
      WBPaper00054571:BPA_F3_germline_upregulated
      WBPaper00055648:germline_expressed
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056090:E.faecalis_downregulated_N2
      WBPaper00056471:S.aureus-4h_downregulated_N2
      WBPaper00057288:Cold_upregulated_transcript
      WBPaper00057288:iff-1(RNAi)_upregulated_transcript
      WBPaper00058691:cfp-1(tm6369)_upregulated
      WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
      WBPaper00059567:olrn-1(ums9)_regulated
      WBPaper00060683:hlh-11(ko1)_downregulated
      WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00061527:F31C3.4_6048-cutc-1_15804
      WBPaper00061651:PHso_enriched
      WBPaper00062669:extracellular-vesicle_protein
      WBPaper00064071:NHR-49_interacting
      WBPaper00064716:paraquat_upregulated
      WBPaper00064789:Day12_vs_Day1_downregulated_neuron
      WBPaper00065120:body-muscle-transcriptome
      WBPaper00065373:Cisplatin_downregulated_WT
      WBPaper00065975:P-body_vs_oocyte_enriched
      WBPaper00065975:P-body_vs_WholeAnimal_enriched
      WBPaper00065993:glp-1(e2141)_downregulated
      cgc4386_cluster_4_4
      cgc4489_group_2
      WBPaper00025032:cluster_92
      WBPaper00025032:PAL-1_target_genes
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00031003:hlh_1_enriched
      WBPaper00035588:alg-1(-)_upregulated
      WBPaper00035905:FBF-1_Associated
      WBPaper00037611:RNP-8-associated
      WBPaper00040210:Chlorpyrifos_16C_regulated
      WBPaper00040963:TA200_down
      WBPaper00040963:TA300_down
      WBPaper00041002:HF_3d_0.2mM_Up
      WBPaper00041002:HF_3d_2.0mM_Up
      WBPaper00041606:CE_B.thuringiensis-DB27_regulated
      WBPaper00041606:CE_S.marcescens_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00042236:flcn-1(ok975)_upregulated
      WBPaper00045263:0.1mM-paraquat_upregulated
      WBPaper00048989:N2_allantoin_upregulated
      WBPaper00048989:N2_rapamycin_downregulated
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053236:Starvation_regulated_N2
      [cgc5767]:cluster_6
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_E_pi(122_min)
      [cgc5767]:expression_class_E_pi(143_min)
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_MD
      [cgc5767]:expression_class_MDE
      [cgc5767]:expression_class_MD_pd(23_min)
      [cgc5767]:expression_class_ME
      [cgc6390]:mixed_oogenesis-somatic
    Interaction (11)
  Map_info: Positive: Positive_clone: C35D10 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III -2.41089
  Reference: WBPaper00038491
    WBPaper00055090
  Method: Gene