WormBase Tree Display for Gene: WBGene00016422
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| WBGene00016422 | SMap | S_parent | Sequence | C34G6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | noah-1 | Person_evidence | WBPerson545 | |||||
| WBPerson3379 | |||||||||
| Sequence_name | C34G6.6 | ||||||||
| Molecular_name | C34G6.6a | ||||||||
| C34G6.6a.1 | |||||||||
| CE47123 | |||||||||
| C34G6.6b | |||||||||
| CE47472 | |||||||||
| C34G6.6c | |||||||||
| CE47456 | |||||||||
| C34G6.6b.1 | |||||||||
| C34G6.6c.1 | |||||||||
| Other_name | CELE_C34G6.6 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | noah-1 | ||||||||
| DB_info | Database | AceView | gene | 1G452 | |||||
| WormQTL | gene | WBGene00016422 | |||||||
| WormFlux | gene | WBGene00016422 | |||||||
| NDB | locus_tag | CELE_C34G6.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016422|UniProtKB=H8W3Y1 | |||||||
| family | PTHR47327 | ||||||||
| NCBI | gene | 172261 | |||||||
| RefSeq | protein | NM_171838.8 | |||||||
| NM_170870.9 | |||||||||
| NM_001263093.4 | |||||||||
| TREEFAM | TREEFAM_ID | TF326431 | |||||||
| TrEMBL | UniProtAcc | Q8T3B7 | |||||||
| H2KZ73 | |||||||||
| H8W3Y1 | |||||||||
| UniProt_GCRP | UniProtAcc | H8W3Y1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 28 Jul 2005 14:10:17 | WBPerson2970 | Name_change | CGC_name | noah-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | noah | ||||||||
| Allele (53) | |||||||||
| Strain | WBStrain00036349 | ||||||||
| WBStrain00026588 | |||||||||
| WBStrain00054765 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00022109 | ||||||||
| 00022110 | |||||||||
| Ortholog (33) | |||||||||
| Paralog (15) | |||||||||
| Structured_description | Concise_description | noah-1 encodes a PAN and ZP domain-containing protein that is related to the Drosophila extracellular matrix component NompA (no-mechanoreceptor-potential A); loss of noah-1 function via RNAi indicates that NOAH-1 activity is essential for molting; in addition, NOAH-1 appears to be required for embryonic and larval development, vulval development, coordinated locomotion, and normal body morphology. | Paper_evidence | WBPaper00004402 | |||||
| WBPaper00004651 | |||||||||
| WBPaper00006395 | |||||||||
| WBPaper00025054 | |||||||||
| WBPaper00026763 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 15 Nov 2007 00:00:00 | ||||||||
| Automated_description | Involved in molting cycle. Predicted to be located in membrane. Expressed in vulA; vulB1; vulB2; vulC; and vulD. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C34G6.6a | |||||||
| C34G6.6b | |||||||||
| C34G6.6c | |||||||||
| Corresponding_CDS_history | C34G6.6a:wp230 | ||||||||
| C34G6.6b:wp185 | |||||||||
| C34G6.6b:wp230 | |||||||||
| Corresponding_transcript | C34G6.6a.1 | ||||||||
| C34G6.6b.1 | |||||||||
| C34G6.6c.1 | |||||||||
| Other_sequence (46) | |||||||||
| Associated_feature (30) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00000889 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00112530 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00024737 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00066774 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041932 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00003085 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00024738 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00090838 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr14711 | ||||||||
| Expr14713 | |||||||||
| Expr15949 | |||||||||
| Expr1022591 | |||||||||
| Expr1037039 | |||||||||
| Expr1145939 | |||||||||
| Expr2014343 | |||||||||
| Expr2032584 | |||||||||
| Drives_construct | WBCnstr00028080 | ||||||||
| WBCnstr00040354 | |||||||||
| Construct_product | WBCnstr00028080 | ||||||||
| WBCnstr00040354 | |||||||||
| Microarray_results (28) | |||||||||
| Expression_cluster (356) | |||||||||
| Interaction (79) | |||||||||
| Map_info | Map | I | Position | 0.472301 | Error | 0.000165 | |||
| Positive | Positive_clone | C34G6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00029429 | ||||||||
| WBPaper00041497 | |||||||||
| WBPaper00041771 | |||||||||
| WBPaper00051259 | |||||||||
| WBPaper00056673 | |||||||||
| WBPaper00061203 | |||||||||
| WBPaper00065319 | |||||||||
| WBPaper00065707 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
