WormBase Tree Display for Gene: WBGene00016409
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| WBGene00016409 | SMap | S_parent | Sequence | C34E10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | sumv-1 | Person_evidence | WBPerson2627 | |||||
| Sequence_name | C34E10.8 | ||||||||
| Molecular_name | C34E10.8 | ||||||||
| C34E10.8.1 | |||||||||
| CE32158 | |||||||||
| Other_name | CELE_C34E10.8 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | sumv-1 | ||||||||
| DB_info | Database | AceView | gene | 3G340 | |||||
| WormQTL | gene | WBGene00016409 | |||||||
| WormFlux | gene | WBGene00016409 | |||||||
| NDB | locus_tag | CELE_C34E10.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016409|UniProtKB=P46582 | |||||||
| family | PTHR16198 | ||||||||
| NCBI | gene | 175720 | |||||||
| RefSeq | protein | NM_065715.5 | |||||||
| SwissProt | UniProtAcc | P46582 | |||||||
| UniProt_GCRP | UniProtAcc | P46582 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 09 Jul 2014 14:33:57 | WBPerson2970 | Name_change | CGC_name | sumv-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sumv | ||||||||
| Allele (69) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00046565 | ||||||||
| 00046566 | |||||||||
| 00046567 | |||||||||
| 00046568 | |||||||||
| 00046569 | |||||||||
| 00046570 | |||||||||
| 00046571 | |||||||||
| 00046572 | |||||||||
| 00046573 | |||||||||
| 00046574 | |||||||||
| Ortholog (21) | |||||||||
| Structured_description | Concise_description | sumv-1 encodes a protein with similarity to the KAT8 NLS2 non-enzymatic subunit of the mammalian KAT8/MOF histone acetyltransferase complex. | Paper_evidence | WBPaper00045315 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 08 Jul 2014 00:00:00 | ||||||||
| Automated_description | Located in cytoplasm; neuron projection; and nucleus. Expressed in hypodermis and neurons. Is an ortholog of human INO80D (INO80 complex subunit D). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C34E10.8 | |||||||
| Corresponding_CDS_history | C34E10.8:wp88 | ||||||||
| Corresponding_transcript | C34E10.8.1 | ||||||||
| Other_sequence | ES739855.1 | ||||||||
| CR04508 | |||||||||
| CRC02127_1 | |||||||||
| HBC22931_1 | |||||||||
| Associated_feature | WBsf651040 | ||||||||
| WBsf992342 | |||||||||
| WBsf992343 | |||||||||
| WBsf992344 | |||||||||
| WBsf992345 | |||||||||
| WBsf1014859 | |||||||||
| WBsf1014860 | |||||||||
| WBsf226654 | |||||||||
| WBsf226655 | |||||||||
| Experimental_info | RNAi_result (13) | ||||||||
| Expr_pattern | Expr11826 | ||||||||
| Expr1021985 | |||||||||
| Expr1037031 | |||||||||
| Expr1145905 | |||||||||
| Expr2017120 | |||||||||
| Expr2035256 | |||||||||
| Drives_construct | WBCnstr00019481 | ||||||||
| WBCnstr00028093 | |||||||||
| Construct_product | WBCnstr00019481 | ||||||||
| WBCnstr00028093 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (126) | |||||||||
| Interaction (38) | |||||||||
| Map_info | Map | III | Position | -1.85641 | |||||
| Positive | Positive_clone | C34E10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027634 | ||||||||
| WBPaper00045315 | |||||||||
| WBPaper00048821 | |||||||||
| WBPaper00065308 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
