WormBase Tree Display for Gene: WBGene00016362
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| WBGene00016362 | SMap | S_parent | Sequence | C33G8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | spig-10 | Person_evidence | WBPerson260 | |||||
| Sequence_name | C33G8.4 | ||||||||
| Molecular_name | C33G8.4 | ||||||||
| C33G8.4.1 | |||||||||
| CE06913 | |||||||||
| Other_name | CELE_C33G8.4 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | spig-10 | ||||||||
| DB_info | Database | AceView | gene | 5H485 | |||||
| WormQTL | gene | WBGene00016362 | |||||||
| WormFlux | gene | WBGene00016362 | |||||||
| NDB | locus_tag | CELE_C33G8.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016362|UniProtKB=Q18399 | |||||||
| family | PTHR33272 | ||||||||
| NCBI | gene | 183176 | |||||||
| RefSeq | protein | NM_072372.6 | |||||||
| TREEFAM | TREEFAM_ID | TF318907 | |||||||
| TrEMBL | UniProtAcc | Q18399 | |||||||
| UniProt_GCRP | UniProtAcc | Q18399 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Jan 2023 20:48:33 | WBPerson51134 | Name_change | CGC_name | spig-10 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | spig | ||||||||
| Allele (18) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (20) | |||||||||
| Paralog (18) | |||||||||
| Structured_description | Automated_description | Enriched in ALN; amphid sheath cell; intestine; and sensory neurons based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and age-1 based on microarray and RNA-seq studies. Is affected by fourteen chemicals including rotenone; D-glucose; and bisphenol A based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Domain of unknown function (DUF4473) and Protein of unknown function DUF4473. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C33G8.4 | |||||||
| Corresponding_transcript | C33G8.4.1 | ||||||||
| Associated_feature | WBsf646908 | ||||||||
| WBsf1000410 | |||||||||
| WBsf231927 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00011556 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00029479 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041796 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010713 | ||||||||
| Expr1145813 | |||||||||
| Expr2001359 | |||||||||
| Expr2019583 | |||||||||
| Drives_construct | WBCnstr00028130 | ||||||||
| Construct_product | WBCnstr00028130 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (136) | |||||||||
| Interaction (23) | |||||||||
| Map_info | Map | V | Position | 0.497209 | |||||
| Positive | Positive_clone | C33G8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00041771 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
