WormBase Tree Display for Gene: WBGene00016362
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WBGene00016362 | SMap | S_parent | Sequence | C33G8 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | spig-10 | Person_evidence | WBPerson260 | |||
Sequence_name | C33G8.4 | ||||||
Molecular_name | C33G8.4 | ||||||
C33G8.4.1 | |||||||
CE06913 | |||||||
Other_name | CELE_C33G8.4 | Accession_evidence | NDB | BX284605 | |||
Public_name | spig-10 | ||||||
DB_info | Database | AceView | gene | 5H485 | |||
WormQTL | gene | WBGene00016362 | |||||
WormFlux | gene | WBGene00016362 | |||||
NDB | locus_tag | CELE_C33G8.4 | |||||
Panther | gene | CAEEL|WormBase=WBGene00016362|UniProtKB=Q18399 | |||||
family | PTHR33272 | ||||||
NCBI | gene | 183176 | |||||
RefSeq | protein | NM_072372.6 | |||||
TREEFAM | TREEFAM_ID | TF318907 | |||||
TrEMBL | UniProtAcc | Q18399 | |||||
UniProt_GCRP | UniProtAcc | Q18399 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | spig | ||||||
Allele (18) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (20) | |||||||
Paralog (18) | |||||||
Structured_description | Automated_description | Enriched in ALN; amphid sheath cell; intestine; and sensory neurons based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and age-1 based on microarray and RNA-seq studies. Is affected by fourteen chemicals including rotenone; D-glucose; and bisphenol A based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Domain of unknown function (DUF4473) and Protein of unknown function DUF4473. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C33G8.4 | |||||
Corresponding_transcript | C33G8.4.1 | ||||||
Associated_feature | WBsf646908 | ||||||
WBsf1000410 | |||||||
WBsf231927 | |||||||
Experimental_info | RNAi_result | WBRNAi00011556 | Inferred_automatically | RNAi_primary | |||
WBRNAi00029479 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00041796 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1010713 | ||||||
Expr1145813 | |||||||
Expr2001359 | |||||||
Expr2019583 | |||||||
Drives_construct | WBCnstr00028130 | ||||||
Construct_product | WBCnstr00028130 | ||||||
Microarray_results (19) | |||||||
Expression_cluster (136) | |||||||
Interaction (23) | |||||||
Map_info | Map | V | Position | 0.497209 | |||
Positive | Positive_clone | C33G8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00041771 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |