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WormBase Tree Display for Gene: WBGene00016340

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Name Class

WBGene00016340SMapS_parentSequenceC33C12
IdentityVersion2
NameCGC_namegba-2Person_evidenceWBPerson17187
Sequence_nameC33C12.8
Molecular_nameC33C12.8
C33C12.8.1
CE41877
Other_nameCELE_C33C12.8Accession_evidenceNDBBX284602
Public_namegba-2
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:57WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
202 Mar 2012 16:42:47WBPerson2970Name_changeCGC_namegba-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classgba
Allele (262)
RNASeq_FPKM (74)
GO_annotation00028314
00028315
00028316
00028317
00028318
00028319
00028320
00028321
00121976
00121977
Contained_in_operonCEOP2064
Ortholog (42)
ParalogWBGene00008706Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00016335Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00021160Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable glucosylceramidase activity. Predicted to be involved in glucosylceramide catabolic process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC33C12.8
Corresponding_CDS_historyC33C12.8:wp185
Corresponding_transcriptC33C12.8.1
Associated_featureWBsf986897
WBsf986898
WBsf986899
WBsf986900
WBsf1011687
WBsf222751
Experimental_infoRNAi_resultWBRNAi00041744Inferred_automaticallyRNAi_primary
WBRNAi00011521Inferred_automaticallyRNAi_primary
WBRNAi00029460Inferred_automaticallyRNAi_primary
Expr_patternExpr1023923
Expr1145765
Expr2011951
Expr2030188
Microarray_results (18)
Expression_clusterWBPaper00032528:L3_depleted
WBPaper00038168:lin-15B(n744)_downregulated
WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
WBPaper00040560:hpl-2_L3_upregulated
WBPaper00042194:Tryptophan_upregulated
WBPaper00042215:wdr-23(tm1817)_upregulated
WBPaper00042561:smg-2(RNAi)_upregulated
WBPaper00042561:smgl-1(RNAi)_upregulated
WBPaper00044260:1-methylnicotinamide_upregulated
WBPaper00044316:CH3HgCl_7.5uM_upregulated
WBPaper00044426:rotenone_5day_upregulated
WBPaper00045050:drh-3 (ne4253)_downregulated
WBPaper00045390:tunicamycin_downregulated
WBPaper00045401:N.parisii_40h_downregulated
WBPaper00045571:germline-ablation_upregulated
WBPaper00045774:clk-1_downregulated
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_12h
WBPaper00047131:daf-2(e1370)_downregulated_N2-background
WBPaper00049018:ham-3(RNAi)_upregulated
WBPaper00049368:daf-2(e1370)_downregulated
WBPaper00049498:npr-1(ur89)_regulated_7
WBPaper00049635:dop-1(vs100)_upregulated
WBPaper00049920:hyl-2(tm2031)_upregulated
WBPaper00049954:BPA_upregulated
WBPaper00049954:BPS_upregulated
WBPaper00050080:rbr-2(tm3141)_upregulated
WBPaper00050163:let-418(RNAi)_upregulated_100-cell-embryo
WBPaper00050561:indole_0.1mM-indole_upregulated
WBPaper00050561:indole_10-fold_upregulated
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00051021:4-bromodiphenyl-ether_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053295:lin-22(ot269)_upregulated
WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
WBPaper00053318:mir-71(n4115)_upregulated_mRNA
WBPaper00053388:dauer_regulated_Cluster3
WBPaper00053713:Starvation-induced_postdauer_vs_control_upregulated
WBPaper00053771:up_at_24h-NaCl
WBPaper00054796:cav-1(RNAi)_downregulated
WBPaper00055013:hmg-3(bar24)_upregulated
WBPaper00055354:Psora-Allantoin_upregulated
WBPaper00055354:Psora_upregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Psora_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055354:Rifampicin-Psora_upregulated
WBPaper00055971:nhl-2(ok818)_20C_downregulated
WBPaper00056167:Cry5B_downregulated
WBPaper00056275:P.aeruginosa_upregulated
WBPaper00056275:P.aeruginosa_upregulated_atf-7(qd22qd130)_dependent
WBPaper00056275:P.aeruginosa_upregulated_pmk-1(km25)_dependent
WBPaper00056290:mdt-15(mg584)_upregulated
WBPaper00056443:DietaryRestriction_downregulated
WBPaper00056809:smn-1(ok355)_upregulated
WBPaper00057068:Cadmium_upregulated
WBPaper00057068:ints-4(RNAi)_downregulated_Cadmium
WBPaper00057288:Cold_upregulated_transcript
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00058599:benzimidazoles_upregulated
WBPaper00058711:paraquat_upregulated
WBPaper00058711:skn-1(lax188)_downregulated
WBPaper00058711:wdr-5(ok1417)_upregulated
WBPaper00058725:sftb-1(cer6)_upregulated
WBPaper00059117:B.subtilis_upregulated
WBPaper00059253:stearic-acid_upregulated
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059604:fluvastatin_downregulated_dlk-1(km12)
WBPaper00059604:fluvastatin_downregulated_N2
WBPaper00059754:C.neoformans_H99_upregulated
WBPaper00059754:E.faecalis_OG1RF_upregulated
WBPaper00059754:P.aeruginosa_PA14_upregulated
WBPaper00059895:wounding_upregulated
WBPaper00059987:Wounding_upregulated
WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060434:pH4.33_vs_pH6.33_uprgulated
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00060871:M.humicola-extract_4h_regulated
WBPaper00060909:atfs-1(et18)_downregulated
WBPaper00061007:HB115_upregulated
WBPaper00061081:E.faecalis_downregulated_skpo-1(ok1640)
WBPaper00061081:skpo-1(ok1640)_upregulated_OG1RF
WBPaper00061081:skpo-1(ok1640)_upregulated_OP50
WBPaper00061341:28C_24h_upregulated
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061479:hda-1(ne4752)_upregulated
WBPaper00061479:mep-1(ne4629)_upregulated
WBPaper00061479:ubc-9(ne4833)_upregulated
WBPaper00061527:gst-26-pho-1_10767
WBPaper00061530:nhr-49(e2144)_downregulated
WBPaper00061590:CGP37157_upregulated
WBPaper00061952:daf-18(nr2037)_upregulated
WBPaper00062156:jmjd-1.2(zr1010)_upregulated
WBPaper00062184:PA14_downregulated
WBPaper00062354:H.zoospora_6h_regulated
WBPaper00062446:nhr-8(hd117)_upregulated
WBPaper00062590:Aging_downregulated_neuron
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064107:lin-35(n745)_upregulated
WBPaper00064291:antimycin_upregulated
WBPaper00064539:nhr-114(gk849)_upregulated
WBPaper00064632:daf-2(e1370)_downregulated_intestine
WBPaper00064788:ketamine_upregulated
WBPaper00065029:cadmium_upregulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065225:nhr-42(tm1375)_downregulated_S.aureus-infected
WBPaper00065288:mdt-15(tm2182)_downregulated
WBPaper00065315:mating_downregulated_Day2-7
WBPaper00065734:unc-25(e156)_downregulated
WBPaper00065746:eat-2(ad1113)_downregulated
WBPaper00065835:mtH2S-AP39-D0-treatment_upregulated_Day5
WBPaper00065835:mtH2S-AP39-D0-treatment_upregulated_Day11
WBPaper00065835:mtH2S-AP39-L1-treatment_upregulated_Day5
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00065995:M.humicola-extract_downregulated_N2
WBPaper00065995:M.humicola-extract_downregulated_old-1(ok1273)
WBPaper00066085:sin-3(tm1276)_upregulated
WBPaper00066110:Doxorubicin_downregulated_diploid
WBPaper00066118:cyclobutrifluram_downregulated
WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00032165:differentially_expressed_with_age_medoid_4
WBPaper00036375:depleted_in_PVD_OLL
WBPaper00037113:CPF_16C_up-regulated
WBPaper00037113:CPF_DZN_16C_up-regulated
WBPaper00037113:DZN_16C_up-regulated
WBPaper00040210:Chlorpyrifos_16C_regulated
WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
WBPaper00040210:Diazinon_24C_regulated
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00041211:RPW-24_Up
WBPaper00041906:I-3690_vs_OP50_10d
WBPaper00041906:I-4317_vs_OP50_10d
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_EtBr-exposed_51h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00044091:Bpseudomallei_induced_12h
WBPaper00047021:MWCNT_upregulated
WBPaper00055899:2,4-Dinitroanisole_regulated
InteractionWBInteraction000032408
WBInteraction000209505
WBInteraction000255093
WBInteraction000284213
WBInteraction000305809
WBInteraction000358606
WBInteraction000407039
Map_infoMapIIPosition-13.8408
PositivePositive_cloneC33C12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00042257
WBPaper00055090
WBPaper00059755
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene