WormBase Tree Display for Gene: WBGene00016292
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| WBGene00016292 | SMap | S_parent | Sequence | C31H2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | tbc-7 | Person_evidence | WBPerson524 | |||||
| WBPerson293 | |||||||||
| Sequence_name | C31H2.1 | ||||||||
| Molecular_name | C31H2.1a | ||||||||
| C31H2.1a.1 | |||||||||
| CE53139 | |||||||||
| C31H2.1b | |||||||||
| CE30886 | |||||||||
| C31H2.1c | |||||||||
| CE53360 | |||||||||
| C31H2.1b.1 | |||||||||
| C31H2.1c.1 | |||||||||
| C31H2.1c.2 | |||||||||
| Other_name | CELE_C31H2.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | tbc-7 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 23 Jun 2008 18:34:24 | WBPerson2970 | Name_change | CGC_name | tbc-7 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tbc | ||||||||
| Allele (222) | |||||||||
| Strain | WBStrain00051771 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00003966 | ||||||||
| 00003967 | |||||||||
| 00003968 | |||||||||
| 00003969 | |||||||||
| Ortholog (34) | |||||||||
| Structured_description | Automated_description | Predicted to be located in cytoplasmic vesicle; membrane; and synapse. Expressed in head and intestine. Human ortholog(s) of this gene implicated in DOORS syndrome; epilepsy (multiple); and nonsyndromic deafness (multiple). Is an ortholog of human TBC1D24 (TBC1 domain family member 24). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0111627 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29203) | ||||
| DOID:0110586 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29203) | ||||||
| DOID:11832 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29203) | ||||||
| DOID:0060475 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29203) | ||||||
| DOID:0111645 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29203) | ||||||
| DOID:0110532 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29203) | ||||||
| DOID:0050563 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29203) | ||||||
| DOID:0080449 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29203) | ||||||
| Molecular_info | Corresponding_CDS | C31H2.1a | |||||||
| C31H2.1b | |||||||||
| C31H2.1c | |||||||||
| Corresponding_CDS_history | C31H2.1a:wp271 | ||||||||
| Corresponding_transcript | C31H2.1a.1 | ||||||||
| C31H2.1b.1 | |||||||||
| C31H2.1c.1 | |||||||||
| C31H2.1c.2 | |||||||||
| Other_sequence (15) | |||||||||
| Associated_feature | WBsf648078 | ||||||||
| WBsf662362 | |||||||||
| WBsf662745 | |||||||||
| WBsf662746 | |||||||||
| WBsf662747 | |||||||||
| WBsf1005187 | |||||||||
| WBsf1005188 | |||||||||
| WBsf235676 | |||||||||
| Experimental_info | RNAi_result (20) | ||||||||
| Expr_pattern | Expr14922 | ||||||||
| Expr16465 | |||||||||
| Expr1012596 | |||||||||
| Expr1036968 | |||||||||
| Expr1145652 | |||||||||
| Expr2017334 | |||||||||
| Expr2035470 | |||||||||
| Drives_construct | WBCnstr00028185 | ||||||||
| WBCnstr00041585 | |||||||||
| WBCnstr00043043 | |||||||||
| Construct_product | WBCnstr00028185 | ||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (179) | |||||||||
| Interaction | WBInteraction000007842 | ||||||||
| WBInteraction000196651 | |||||||||
| Map_info | Map | X | Position | -6.17249 | Error | 0.002987 | |||
| Positive | Positive_clone | C31H2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031212 | ||||||||
| WBPaper00036589 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00058945 | |||||||||
| WBPaper00064934 | |||||||||
| WBPaper00065265 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
