WormBase Tree Display for Gene: WBGene00016292
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WBGene00016292 | SMap | S_parent | Sequence | C31H2 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | tbc-7 | Person_evidence | WBPerson524 | |||
WBPerson293 | |||||||
Sequence_name | C31H2.1 | ||||||
Molecular_name | C31H2.1a | ||||||
C31H2.1a.1 | |||||||
CE53139 | |||||||
C31H2.1b | |||||||
CE30886 | |||||||
C31H2.1c | |||||||
CE53360 | |||||||
C31H2.1b.1 | |||||||
C31H2.1c.1 | |||||||
C31H2.1c.2 | |||||||
Other_name | CELE_C31H2.1 | Accession_evidence | NDB | BX284606 | |||
Public_name | tbc-7 | ||||||
DB_info | Database (11) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | tbc | ||||||
Allele (222) | |||||||
Strain | WBStrain00051771 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00003966 | ||||||
00003967 | |||||||
00003968 | |||||||
00003969 | |||||||
Ortholog (34) | |||||||
Structured_description | Automated_description | Predicted to be located in cytoplasmic vesicle; membrane; and synapse. Expressed in head and intestine. Human ortholog(s) of this gene implicated in DOORS syndrome; epilepsy (multiple); and nonsyndromic deafness (multiple). Is an ortholog of human TBC1D24 (TBC1 domain family member 24). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0111627 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29203) | ||
DOID:0110586 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29203) | ||||
DOID:11832 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29203) | ||||
DOID:0060475 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29203) | ||||
DOID:0111645 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29203) | ||||
DOID:0110532 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29203) | ||||
DOID:0050563 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29203) | ||||
DOID:0080449 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29203) | ||||
Molecular_info | Corresponding_CDS | C31H2.1a | |||||
C31H2.1b | |||||||
C31H2.1c | |||||||
Corresponding_CDS_history | C31H2.1a:wp271 | ||||||
Corresponding_transcript | C31H2.1a.1 | ||||||
C31H2.1b.1 | |||||||
C31H2.1c.1 | |||||||
C31H2.1c.2 | |||||||
Other_sequence (15) | |||||||
Associated_feature | WBsf648078 | ||||||
WBsf662362 | |||||||
WBsf662745 | |||||||
WBsf662746 | |||||||
WBsf662747 | |||||||
WBsf1005187 | |||||||
WBsf1005188 | |||||||
WBsf235676 | |||||||
Experimental_info | RNAi_result (20) | ||||||
Expr_pattern | Expr14922 | ||||||
Expr16465 | |||||||
Expr1012596 | |||||||
Expr1036968 | |||||||
Expr1145652 | |||||||
Expr2017334 | |||||||
Expr2035470 | |||||||
Drives_construct | WBCnstr00028185 | ||||||
WBCnstr00041585 | |||||||
WBCnstr00043043 | |||||||
Construct_product | WBCnstr00028185 | ||||||
Microarray_results (27) | |||||||
Expression_cluster (179) | |||||||
Interaction | WBInteraction000007842 | ||||||
WBInteraction000196651 | |||||||
Map_info | Map | X | Position | -6.17249 | Error | 0.002987 | |
Positive | Positive_clone | C31H2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00031212 | ||||||
WBPaper00036589 | |||||||
WBPaper00038491 | |||||||
WBPaper00055090 | |||||||
WBPaper00058945 | |||||||
WBPaper00064934 | |||||||
WBPaper00065265 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |