Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00016088

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00016088SMapS_parentSequenceC25B8
IdentityVersion2
NameCGC_nameclec-266Person_evidenceWBPerson2531
Sequence_nameC25B8.4
Molecular_nameC25B8.4a
C25B8.4a.1
CE27087
C25B8.4b
CE34259
C25B8.4c
CE34260
C25B8.4b.1
C25B8.4c.1
Other_nameCELE_C25B8.4Accession_evidenceNDBBX284606
Public_nameclec-266
DB_infoDatabaseAceViewgeneXH236
WormQTLgeneWBGene00016088
WormFluxgeneWBGene00016088
NDBlocus_tagCELE_C25B8.4
PanthergeneCAEEL|WormBase=WBGene00016088|UniProtKB=H2KZ07
familyPTHR22802
NCBIgene180932
RefSeqproteinNM_001029256.4
NM_001392791.1
NM_001029257.5
TREEFAMTREEFAM_IDTF316271
TrEMBLUniProtAccH2KZ06
H2KZ07
Q7Z121
UniProt_GCRPUniProtAccH2KZ07
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:57WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
209 Oct 2007 15:40:28WBPerson2970Name_changeCGC_nameclec-266
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classclec
Allele (72)
StrainWBStrain00036366
WBStrain00051150
RNASeq_FPKM (74)
GO_annotation00022014
00022015
00022016
Ortholog (45)
Paralog (24)
Structured_descriptionAutomated_descriptionPredicted to enable carbohydrate binding activity. Predicted to be located in external side of plasma membrane. Expressed in intestinal cell.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC25B8.4a
C25B8.4b
C25B8.4c
Corresponding_transcriptC25B8.4a.1
C25B8.4b.1
C25B8.4c.1
Other_sequenceGE625313.1
CRC04609_1
Oden_isotig22084
CR07117
GE626085.1
CRC05725_1
GE626570.1
GE625727.1
GE625068.1
Associated_feature (20)
Experimental_infoRNAi_resultWBRNAi00041161Inferred_automaticallyRNAi_primary
WBRNAi00001487Inferred_automaticallyRNAi_primary
WBRNAi00011147Inferred_automaticallyRNAi_primary
WBRNAi00029183Inferred_automaticallyRNAi_primary
WBRNAi00041162Inferred_automaticallyRNAi_primary
WBRNAi00041164Inferred_automaticallyRNAi_primary
Expr_patternExpr12639
Expr1019626
Expr1036874
Expr1145193
Expr2010158
Expr2028401
Drives_constructWBCnstr00022346
WBCnstr00028333
Construct_productWBCnstr00022346
WBCnstr00028333
Microarray_results (32)
Expression_clusterWBPaper00024505:pharyngeal_enriched
WBPaper00028451:Oogenic_protein
WBPaper00030922:glycosylated_protein
WBPaper00033065:cyc-1(RNAi)_downregulated
WBPaper00036231:long-telomeres_upregulated
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:intestine_embryo_enriched
WBPaper00037950:intestine_embryo_SelectivelyEnriched
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_embryo_enriched
WBPaper00037950:pharyngeal-muscle_embryo_SelectivelyEnriched
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00038168:lin-15B(n744)_upregulated
WBPaper00038289:oocyte_protein
WBPaper00038438:E.faecalis_24hr_downregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00038438:S.marcescens_24hr_downregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_downregulated_TilingArray
WBPaper00040285:H2S_24hr_upregulated
WBPaper00041072:UTX-1_interacting_protein
WBPaper00041954:ethanol_upregulated
WBPaper00042561:smg-2(RNAi)_upregulated
WBPaper00042561:smgl-1(RNAi)_downregulated
WBPaper00044260:1-methylnicotinamide_downregulated
WBPaper00044260:nicotic-acid_downregulated
WBPaper00044316:CH3HgCl_7.5uM_downregulated
WBPaper00044426:rotenone_5day_downregulated
WBPaper00044746:aging_upregulated_Day5
WBPaper00044746:aging_upregulated_HeatShock
WBPaper00045050:csr-1(hypomorph)_upregulated
WBPaper00045390:ubc-9(RNAi)_downregulated
WBPaper00045417:128Q-huntingtin_downreglated
WBPaper00045521:Oogenic
WBPaper00045618:puf-8_downregulated
WBPaper00045729:gld-2(RNAi)_downregulated
WBPaper00045774:clk-1_downregulated
WBPaper00046337:polysomal_daf-2_vs_daf-2;daf-16_upregulated
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00046805:csr-1(RNAi)_downregulated_Set1
WBPaper00046805:csr-1(RNAi)_downregulated_Set2
WBPaper00049098:heat-induced_hrde-1(tm1200)
WBPaper00049098:hrde-1(tm1200)-induced_23C
WBPaper00049498:npr-1(ur89)_regulated_4
WBPaper00049736:daf-2(e1370)_upregulated_15deg-then-25deg(12hr)
WBPaper00049905:Age_variant_expression
WBPaper00050121:mir-60(n4947)_upregulated
WBPaper00050234:lin-28(RNAi)_upregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050712:RC301_vs_DA650_4h-PA_upregulated
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050726:starvation_regulated_LowSalt
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050990:body-muscle_enriched
WBPaper00050990:body-muscle_expressed
WBPaper00051039:germline_enriched
WBPaper00051265:F1_hrde-1(tm1200)_downregulated
WBPaper00051265:F4_hrde-1(tm1200)_downregulated
WBPaper00051305:vit-2(ac3)_upregulated
WBPaper00051311:VGLN-1-interacting
WBPaper00051352:Long-Term-Association-Memory_upregulated
WBPaper00051388:Glucose-diet_upregulated
WBPaper00053020:sid-3(ok973)_downregulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
WBPaper00053318:Aging_upregulated_mRNA_N2
WBPaper00053318:mir-71(n4115)_upregulated_mRNA
WBPaper00053321:embryo-to-L1_downregulated_nos-1(gv5)nos-2(RNAi)_SMARTseq
WBPaper00053321:embryo-to-L1_downregulated_WT_SMARTseq
WBPaper00053321:PGCs_depleted_NuGen
WBPaper00053402:his-3(RNAi)_upregulated
WBPaper00053599:mitosis_vs_meiosis_downregulated
WBPaper00053599:oocyte_vs_mitosis_downregulated
WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_upregulated
WBPaper00053606:N2_vs_elt-2(ca15)_upregulated
WBPaper00053615:SMO-1_target
WBPaper00053664:ins-11(tm1053)_upregulated
WBPaper00053771:up_at_24h-NaCl
WBPaper00053771:up_at_dpy-7(e88)
WBPaper00053810:isp-1(qm150)_upregulated
WBPaper00053814:15C_downregulated_OP50
WBPaper00053814:15C_downregulated_PY79
WBPaper00054493:hpl-2(tm1489)_downregulated
WBPaper00054872:egl-9(sa307)_upregulated
WBPaper00055013:hmg-3(bar24)_upregulated
WBPaper00055060:flr-1(RNAi)_upregulated
WBPaper00055354:Psora-Allantoin_upregulated
WBPaper00055354:Psora_upregulated
WBPaper00055354:Rapamycin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Metformin_upregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Psora_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
WBPaper00055354:Rapamycin-Rifampicin_upregulated
WBPaper00055354:Rapamycin_downregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055354:Rifampicin-Psora_upregulated
WBPaper00055354:Rifampicin_upregulated
WBPaper00055386:daf-2(e1370)_downregulated
WBPaper00055386:eat-2(ad465)_downregulated
WBPaper00055482:Tunicamycin_upregulated
WBPaper00055626:pry-1(mu38)_downregulated
WBPaper00055827:daf-2(e1370)_upregulated
WBPaper00055971:nhl-2(ok818)_20C_upregulated
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056034:pals-22(jy3)_downregulated
WBPaper00056039:efa-6(tm3124)_upregulated
WBPaper00056039:hda-6(ok3203)_downregulated
WBPaper00056039:ptl-1(ok621)_upregulated
WBPaper00056039:ptrn-1(tm5597)_upregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056139:gut-microbiota_downregulated
WBPaper00056139:soil-microbiota_upregulated
WBPaper00056161:hermaphrodite_enriched_siRNA
WBPaper00056167:Cry5B_upregulated
WBPaper00056443:DietaryRestriction_upregulated
WBPaper00056446:hsb-1(cg116)_upregulated
WBPaper00056586:kri-1(ok1251);mpk-2(ok219)_downregulated
WBPaper00056731:human-amylin_upregulated
WBPaper00056809:smn-1(ok355)_upregulated
WBPaper00056826:hmc_biased
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057006:DietaryRestriction_downregulated
WBPaper00057288:Cold_downregulated_transcript
WBPaper00057288:iff-1(RNAi)_downregulated_transcript
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058711:paraquat_upregulated
WBPaper00058711:wdr-5(ok1417)_upregulated
WBPaper00058948:npr-8(ok1439)_upregulated_OP50
WBPaper00058955:heatshock_upregulated_CE
WBPaper00059027:neuron-synapses_enriched
WBPaper00059117:B.subtilis_downregulated
WBPaper00059224:tph-1(mg280)_upregulated
WBPaper00059421:daf-1(m40);daf-3(mgDf90)_downregulated
WBPaper00059471:EGL-43_interacting
WBPaper00059477:hlh-2(RNAi)_regulated
WBPaper00059728:5ug_cholesterol_downregulated
WBPaper00059728:20ug_cholesterol_downregulated
WBPaper00059739:hira-1(gk835598)_upregulated_adult
WBPaper00059739:hira-1(gk835598)_upregulated_L1
WBPaper00059824:rnp-6(dh1127)_regulated_OP50
WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
WBPaper00060224:atf-6(ok551)_upregulated
WBPaper00060434:pH4.33_vs_pH6.33_downrgulated
WBPaper00060445:nfki-1(cer1)_downregulated_L1
WBPaper00060459:bcat-1(RNAi)_downregulated
WBPaper00060661:sensory-neuron_enriched
WBPaper00060764:swsn-1(os22ts)_downregulated
WBPaper00060921:tdc-1(n3419)_downregulated
WBPaper00061203:let-418(n3536)_upregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061274:hypergravity_10xg_upregulated
WBPaper00061274:hypergravity_15xg_upregulated
WBPaper00061274:microgravity_upregulated
WBPaper00061340:ABarpaaa_lineage
WBPaper00061340:AIN_parent
WBPaper00061340:AVA
WBPaper00061340:AVE
WBPaper00061340:AVH_parent
WBPaper00061340:B
WBPaper00061340:CAN
WBPaper00061340:CEPsh
WBPaper00061340:CEPso
WBPaper00061340:Ciliated_amphid_neuron
WBPaper00061340:Ciliated_non_amphid_neuron
WBPaper00061340:Excretory_cell_parent
WBPaper00061340:F_U
WBPaper00061340:Glia
WBPaper00061340:hyp1V_and_ant_arc_V
WBPaper00061340:hyp3
WBPaper00061340:IL1_parent
WBPaper00061340:ILso
WBPaper00061340:Intestine
WBPaper00061340:Neuroblast_AFD_RMD
WBPaper00061340:Neuroblast_ALA_RMED
WBPaper00061340:Neuroblast_BAG_SMDVx
WBPaper00061340:Neuroblast_IL1_IL2
WBPaper00061340:Parents_of_U_F_B_DVA
WBPaper00061340:Parents_of_Y_DA6_DA7_DA9
WBPaper00061340:Parent_of_hyp1V_and_ant_arc_V
WBPaper00061340:Pharyngeal_neuron
WBPaper00061340:RIA_parent
WBPaper00061340:RID_parent
WBPaper00061340:RME_LR_parent
WBPaper00061340:URA_parent
WBPaper00061340:Y
WBPaper00061341:28C_24h_upregulated
WBPaper00061341:28C_48h_upregulated
WBPaper00061424:Diet_MYb120_downregulated
WBPaper00061424:Diet_MYb131_upregulated
WBPaper00061478:SUMO-conjugated_protein
WBPaper00061479:HDA-1_interacting_protein
WBPaper00061479:mep-1(ne4629)_upregulated
WBPaper00061479:ubc-9(ne4833)_upregulated
WBPaper00061527:ZK1053.4-C08F1.6
WBPaper00061613:human-amyloid-beta_alpha-Synuclein(A53T)_upregulated
WBPaper00061853:osm-3(dh441)_upregulated
WBPaper00061853:osm-3(dh441)_upregulated_tunicamycin
WBPaper00061902:camt-1(ok515)_regulated_RMG
WBPaper00061952:daf-18(yh1)_downregulated
WBPaper00062146:MOG-7-degron_2h_regulated
WBPaper00062156:jmjd-5(zr1234)_updownregulated
WBPaper00062159:hda-2(ok1479)_downregulated
WBPaper00062193:daf-16(RNAi)_downregulated
WBPaper00062193:skn-1(RNAi)_downregulated
WBPaper00062237:dnj-21(RNAi)_upregulated_protein
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062440:crh-1(n3315)_downregulated
WBPaper00062456:doxycycline_downregulated_CB4856_protein
WBPaper00062456:doxycycline_downregulated_CB4856_transcript
WBPaper00062456:doxycycline_downregulated_N2_transcript
WBPaper00062491:sma-3(wk30)_upregulated
WBPaper00062497:xpf-1(tm2842)_upregulated
WBPaper00062554:MAGU-2_interacting
WBPaper00062585:hlh-26(ok1453)_downregulated_E.faecium
WBPaper00062590:Aging_upregulated_neuron
WBPaper00062669:extracellular-vesicle_protein
WBPaper00064005:starvation_downregulated_aptf-1(gk794)_mRNA
WBPaper00064005:starvation_downregulated_aptf-1(gk794)_protein
WBPaper00064005:starvation_downregulated_N2_mRNA
WBPaper00064005:starvation_downregulated_N2_protein
WBPaper00064071:NHR-49_interacting
WBPaper00064156:lbp-3(overexpress)_downregulated
WBPaper00064156:lipl-4(overexpress)_downregulated
WBPaper00064163:ZNFX-1_interacting_embryo
WBPaper00064201:SNA-1_interacting
WBPaper00064201:SNA-3_interacting
WBPaper00064403:Heat-killed-E.Coli_upregulated
WBPaper00064502:spe-44(fx110)_upregulated
WBPaper00064716:paraquat_upregulated
WBPaper00064727:daf-2(e1370)_downregulated
WBPaper00064769:him-17(me24)_downregulated
WBPaper00064850:glh-1(sam65)_downregulated
WBPaper00064871:hypoxia_downregulated_F2
WBPaper00064952:Day1_vs_L4_upregulated_25C
WBPaper00064952:Day5_vs_L4_upregulated_25C
WBPaper00064952:Day10_vs_Day1_upregulated_20C
WBPaper00064952:Day10_vs_Day5_upregulated_20C
WBPaper00064952:Day10_vs_L4_upregulated_20C
WBPaper00064952:Day10_vs_L4_upregulated_25C
WBPaper00064999:miR-229-64-65-66_upregulated
WBPaper00065005:sams-3(RNAi)_upregulated
WBPaper00065005:sams-4(RNAi)_upregulated
WBPaper00065096:25C_vs_20C_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065096:npr-8(ok1439)_downregulated_Day1_25C
WBPaper00065096:npr-8(ok1439)_downregulated_Day10_20C
WBPaper00065096:npr-8(ok1439)_downregulated_Day10_25C
WBPaper00065120:body-muscle-transcriptome
WBPaper00065158:25C_vs_15C_upregulated_AFD
WBPaper00065158:25C_vs_15C_upregulated_WholeAnimal
WBPaper00065623:124
WBPaper00065749:endu-2(tm4977)_upregulated
WBPaper00065835:Day11_vs_Day1_upregulated
WBPaper00065835:mtH2S-AP39-D0-treatment_downregulated_Day11
WBPaper00065835:mtH2S-AP39-D0-treatment_upregulated_Day5
WBPaper00065841:1_0
WBPaper00065841:68_1
WBPaper00065975:P-body_vs_oocyte_enriched
WBPaper00065975:P-body_vs_WholeAnimal_enriched
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066005:RAGA-1_degradation_neuronal_upregulated
WBPaper00066005:RAGA-1_degradation_somatic_upregulated
WBPaper00066038:mip-1(how5)_downregulated
WBPaper00066093:E.coli-purE_downregulated
WBPaper00066110:Cisplatin_downregulated_diploid
WBPaper00066110:Doxorubicin_downregulated_diploid
WBPaper00066110:Doxorubicin_downregulated_tetraploid
WBPaper00066110:tetraploid_vs_diploid_downregulated
WBPaper00066204:CdCl2_downregulated_mRNA
WBPaper00066232:ash-2(RNAi)_upregulated_WT
cgc4386_cluster_6_1
cgc4489_group_9
WBPaper00025032:cluster_2
WBPaper00025141:N2_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00027111:eri-1(mg366)_upregulated
WBPaper00027111:rde-3(ne298)_upregulated
WBPaper00027111:rrf-2(ok210)_upregulated
WBPaper00029437:dcr-1_upregulated
WBPaper00029437:rde-4_downregulated
WBPaper00030985:Enterococcus_faecalis_upregulated
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:24hr_muscle_depleted
WBPaper00031003:total_muscle_depleted
WBPaper00032062:age_regulated_genes
WBPaper00032165:differentially_expressed_with_age_medoid_1
WBPaper00032948:FedUp
WBPaper00033101:spr-5_regulated
WBPaper00034739:N2lessDR1350
WBPaper00035227:heat_shock_regulated
WBPaper00035873:dpy-9_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00035873:osm-7_regulated
WBPaper00035873:osm-11_regulated
WBPaper00035905:FBF-1_Associated
WBPaper00036130:mir-243_down_regulated
WBPaper00036286:Pattern_F
WBPaper00036375:depleted_in_PVD_OLL
WBPaper00036464:S.aureus-RN6390_regulated
WBPaper00037113:Diazinon_16C_regulated
WBPaper00039866:ClassComp_daf-19_upregulated
WBPaper00039866:SAM_daf-19_upregulated
WBPaper00040116:pRJ-FR.5_up_regulated
WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
WBPaper00040823:alg-1(gk214)_upregulated
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040963:Q100_down
WBPaper00040963:Q200_down
WBPaper00041002:HF_3d_0.2mM_Down
WBPaper00041002:HF_3d_2.0mM_Down
WBPaper00041174:environmental
WBPaper00041174:genotype_environment_interaction
WBPaper00041174:genotypic
WBPaper00041174:genotypic_and_environmental
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041960:daf-16_fasting_upregulated
WBPaper00041960:kgb-1_fasting_upregulated
WBPaper00041960:N2_fasting_upregulated
WBPaper00041960:N2_fasting_upregulated_9hto12h
WBPaper00041960:N2_fasting_upregulated_anytime
WBPaper00042258:DA1877_downregulated_GravidAdult
WBPaper00042331:a-SWCNTs_upregulated
WBPaper00044091:Bpseudomallei_repressed_12h
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00046639:tyrosol_upregulated
WBPaper00048989:N2_rapamycin_downregulated
WBPaper00050767:Octopamine_induced
WBPaper00053550:daf-19(m86)_upregulated_3-fold-embryo
WBPaper00055899:nitroguanidine_regulated
WBPaper00056330:mrps-5(RNAi)_downregulated
WBPaper00057098:SiO2-nanoparticles_upregulated
[cgc5767]:cluster_2
[cgc5767]:expression_class_E
[cgc5767]:expression_class_E_pi(23_min)
[cgc5767]:expression_class_M
[cgc5767]:expression_class_ME
[cgc6390]:Cluster_E
Interaction (169)
Map_infoMapXPosition-2.71813Error0.008827
PositivePositive_cloneC25B8Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00031686
WBPaper00038491
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene