WormBase Tree Display for Gene: WBGene00015917
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| WBGene00015917 | SMap | S_parent | Sequence | C17G10 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | C17G10.3 | ||||||||
| Molecular_name | C17G10.3 | |||||||||
| Other_name | CELE_C17G10.3 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | C17G10.3 | |||||||||
| DB_info | Database | AceView | gene | 2F875 | ||||||
| WormQTL | gene | WBGene00015917 | ||||||||
| WormFlux | gene | WBGene00015917 | ||||||||
| NDB | locus_tag | CELE_C17G10.3 | ||||||||
| NCBI | gene | 182742 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 21 Oct 2019 15:26:41 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele (25) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00025497 | Caenorhabditis briggsae | From_analysis | Hillier-set | ||||||
| OrthoMCL | ||||||||||
| Inparanoid_8 | ||||||||||
| WBGene00057330 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
| Inparanoid_8 | ||||||||||
| WBGene00057435 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
| Inparanoid_8 | ||||||||||
| WBGene00192816 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| Inparanoid_8 | ||||||||||
| WBGene00121438 | Caenorhabditis japonica | From_analysis | TreeFam | |||||||
| Inparanoid_8 | ||||||||||
| Paralog | WBGene00011171 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| Structured_description | Automated_description | Enriched in several structures, including ABaraapapaa; ABaraapppaa; germ line; neurons; and rect_D based on RNA-seq; tiling array; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and tiling array studies. Is affected by twelve chemicals including manganese chloride; D-glucose; and Zidovudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | C17G10.3:wp151 | ||||||||
| C17G10.3:wp182 | ||||||||||
| C17G10.3:wp274 | ||||||||||
| Corresponding_pseudogene | C17G10.3 | |||||||||
| Associated_feature | WBsf987912 | |||||||||
| WBsf221303 | ||||||||||
| Experimental_info | Expr_pattern | Expr1029036 | ||||||||
| Expr1144882 | ||||||||||
| Expr2000928 | ||||||||||
| Expr2019149 | ||||||||||
| Drives_construct | WBCnstr00028457 | |||||||||
| Construct_product | WBCnstr00028457 | |||||||||
| Microarray_results (16) | ||||||||||
| Expression_cluster (136) | ||||||||||
| Interaction | WBInteraction000306751 | |||||||||
| WBInteraction000409345 | ||||||||||
| WBInteraction000419258 | ||||||||||
| WBInteraction000436226 | ||||||||||
| WBInteraction000449596 | ||||||||||
| Map_info | Positive | Positive_clone | C17G10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | II | -1.10363 | ||||||||
| Method | Gene |
