WormBase Tree Display for Gene: WBGene00015915
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| WBGene00015915 | SMap | S_parent | Sequence | C17G10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C17G10.1 | |||||||
| Molecular_name | C17G10.1 | ||||||||
| C17G10.1.1 | |||||||||
| CE01785 | |||||||||
| C17G10.1.2 | |||||||||
| Other_name | CELE_C17G10.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | C17G10.1 | ||||||||
| DB_info | Database | AceView | gene | 2F887 | |||||
| WormQTL | gene | WBGene00015915 | |||||||
| WormFlux | gene | WBGene00015915 | |||||||
| NDB | locus_tag | CELE_C17G10.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015915|UniProtKB=Q09973 | |||||||
| family | PTHR12117 | ||||||||
| NCBI | gene | 173947 | |||||||
| RefSeq | protein | NM_062687.9 | |||||||
| TREEFAM | TREEFAM_ID | TF105920 | |||||||
| TrEMBL | UniProtAcc | Q09973 | |||||||
| UniProt_GCRP | UniProtAcc | Q09973 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (29) | |||||||||
| Strain | WBStrain00001914 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Contained_in_operon | CEOP2192 | ||||||||
| Ortholog (38) | |||||||||
| Structured_description | Automated_description | Predicted to enable peptidyl-proline dioxygenase activity. Predicted to be involved in regulation of translational termination. Predicted to be located in cytoplasm. Expressed in hypodermis. Is an ortholog of human OGFOD1 (2-oxoglutarate and iron dependent oxygenase domain containing 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C17G10.1 | |||||||
| Corresponding_transcript | C17G10.1.1 | ||||||||
| C17G10.1.2 | |||||||||
| Other_sequence (26) | |||||||||
| Associated_feature | WBsf221306 | ||||||||
| WBsf221307 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00106375 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00010928 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076145 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029020 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007800 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00077897 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00040835 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr2116 | ||||||||
| Expr5288 | |||||||||
| Expr1010358 | |||||||||
| Expr1036804 | |||||||||
| Expr1144879 | |||||||||
| Expr2000926 | |||||||||
| Expr2019147 | |||||||||
| Drives_construct | WBCnstr00002703 | ||||||||
| WBCnstr00028459 | |||||||||
| Construct_product | WBCnstr00028459 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (124) | |||||||||
| Interaction (50) | |||||||||
| Map_info | Positive | Positive_clone | C17G10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -1.06167 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
