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WormBase Tree Display for Gene: WBGene00015879

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Name Class

WBGene00015879SMapS_parentSequenceC17B7
IdentityVersion1
NameSequence_nameC17B7.5
Molecular_nameC17B7.5
C17B7.5.1
CE51529
Other_nameCELE_C17B7.5Accession_evidenceNDBBX284605
Public_nameC17B7.5
DB_infoDatabaseAceViewgene5D817
WormQTLgeneWBGene00015879
WormFluxgeneWBGene00015879
NDBlocus_tagCELE_C17B7.5
PanthergeneCAEEL|WormBase=WBGene00015879|UniProtKB=O45155
familyPTHR12143
NCBIgene178766
RefSeqproteinNM_001322507.2
TREEFAMTREEFAM_IDTF322613
TrEMBLUniProtAccO45155
UniProt_GCRPUniProtAccO45155
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:56WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (108)
RNASeq_FPKM (74)
GO_annotation00033950
00033951
00033952
00033953
00033954
00033955
00121613
00121614
Ortholog (12)
Paralog (19)
Structured_descriptionAutomated_descriptionPredicted to enable peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity. Predicted to be involved in glycoprotein catabolic process and protein quality control for misfolded or incompletely synthesized proteins. Predicted to be located in cytosol and nucleus.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC17B7.5
Corresponding_CDS_historyC17B7.5:wp252
Corresponding_transcriptC17B7.5.1
Experimental_infoRNAi_resultWBRNAi00010893Inferred_automaticallyRNAi_primary
WBRNAi00040766Inferred_automaticallyRNAi_primary
WBRNAi00010892Inferred_automaticallyRNAi_primary
WBRNAi00028988Inferred_automaticallyRNAi_primary
Expr_patternExpr1012388
Expr1144806
Expr2000891
Expr2019111
Drives_constructWBCnstr00028489
Construct_productWBCnstr00028489
Microarray_results (18)
Expression_clusterWBPaper00033065:cyc-1(RNAi)_downregulated
WBPaper00035211:age-1_vs_age-1_downregulated
WBPaper00035211:age-1_vs_N2_downregulated
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:hypodermis_larva_enriched
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
WBPaper00040209:B.thuringiensis_downregulated_MY15
WBPaper00040560:hpl-2_L3_upregulated
WBPaper00042477:rsr-2(RNAi)_upregulated_TilingArray
WBPaper00044260:1-methylnicotinamide_upregulated
WBPaper00044578:reduced-humidity_downregulated_microarray
WBPaper00044736:oscillating_dev_expression
WBPaper00045017:blmp-1(tm548)_upregulated
WBPaper00045390:ubc-9(RNAi)_upregulated
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045618:fbf-1_upregulated
WBPaper00047132:glp-1(ts)-25C_upregulated
WBPaper00048611:MnCl2_upregulated
WBPaper00048988:neuron_expressed
WBPaper00049368:daf-2(e1370)_downregulated
WBPaper00049498:npr-1(ur89)_regulated_1
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
WBPaper00049635:dop-1(vs100)_downregulated
WBPaper00049736:daf-2(e1370)_downregulated_15deg-then-25deg(12hr)
WBPaper00049920:Glucose-Diet_downregulated_hyl-2(tm2031)
WBPaper00049942:hsf-1(RNAi)_downregulated
WBPaper00050015:ifg-1(RNAi)_upregulated
WBPaper00050370:dpy-21(e428)_L3_downregulated
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050743:elli-1(sam-3)_upregulated
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050801:DPY-21_dauer_regulome
WBPaper00050801:SET-4_dauer_regulome
WBPaper00051404:alg-1(gk214)_downregulated
WBPaper00051404:alg-5(ram2)_downregulated
WBPaper00051558:fog-2(q71)_regulated
WBPaper00053295:lin-22(icb38)_upregulated
WBPaper00053295:lin-22(ot267)_upregulated
WBPaper00053295:lin-22(ot269)_upregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
WBPaper00053388:dauer_regulated_Cluster3
WBPaper00053402:cco-1(RNAi)_upregulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:isp-1(qm150)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00053909:N2_vs_CB4856_upregulated
WBPaper00054410:set-26(tm2467)_upregulated
WBPaper00054872:egl-9(sa307)_downregulated
WBPaper00055013:hmg-3(bar24)_upregulated
WBPaper00055013:hmg-4(RNAi)_upregulated
WBPaper00055013:spt-16(RNAi)_upregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Psora_downregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rapamycin_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055354:Rifampicin-Psora_downregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00055941:atfs-1(et15)_upregulated
WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated
WBPaper00055941:nuo-6(qm200)_upregulated
WBPaper00056039:efa-6(tm3124)_downregulated
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_downregulated_N2
WBPaper00056167:Cry5B_downregulated
WBPaper00056169:rrf-3(pk1426)_downregulated_L4
WBPaper00056443:DietaryRestriction_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00057068:numr-1(RNAi)_downregulated
WBPaper00057068:numr-1(RNAi)_downregulated_Cadmium
WBPaper00057158:mdt-15(tm2182)_dependent_15C_downregulated
WBPaper00058711:wdr-5(ok1417)_upregulated
WBPaper00058725:sftb-1(cer6)_downregulated
WBPaper00058948:PA14_upregulated
WBPaper00058969:RIS_depleted
WBPaper00059191:hsp-16.2p-LIN-29_downregulated
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059735:glucose_downregulated_N2
WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
WBPaper00060445:nfki-1(cer1)_ikb-1(nr2027)_downregulated_L4
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00060909:atfs-1(et18)_upregulated
WBPaper00060921:cat-2(e1112)_downregulated
WBPaper00060921:tdc-1(n3419)_downregulated
WBPaper00061081:E.faecalis_downregulated_N2
WBPaper00061341:28C_48h_upregulated
WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
WBPaper00061527:172183_at-176110_at
WBPaper00061613:human-alpha-Synuclein(A53T)_upregulated
WBPaper00061613:human-amyloid-beta_alpha-Synuclein(A53T)_upregulated
WBPaper00061853:osm-3(dh441)_downregulated
WBPaper00061853:osm-3(dh441)_downregulated_tunicamycin
WBPaper00062156:jmjd-5(zr1234)_upregulated
WBPaper00062193:skn-1(RNAi)_downregulated
WBPaper00062347:blmp-1(tm548)_upregulated
WBPaper00062446:nhr-8(hd117)_upregulated
WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
WBPaper00062715:blmp-1(s71)_upregulated
WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064156:lipl-4(overexpress)_upregulated
WBPaper00064494:postdauer_upregulated_WholeAnimal
WBPaper00064532:pals-25(icb98)_downregulated
WBPaper00064539:nhr-114(gk849)_upregulated
WBPaper00064728:cpl-1(W32AY35A)_upregulated
WBPaper00064769:him-17(me24)_upregulated
WBPaper00065029:cadmium_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065288:mdt-15(tm2182)_upregulated
WBPaper00065581:hpk-1(pk1393)_upregulated
WBPaper00065841:0_0
WBPaper00065841:102_0
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066005:RAGA-1_degradation_neuronal_downregulated
WBPaper00066062:xrep-4(lax137)_upregulated
WBPaper00066118:cyclobutrifluram_downregulated
WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
WBPaper00066204:CdCl2_upregulated_mRNA
cgc4489_group_17
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026952:class_B
WBPaper00030985:Photorhabdus_luminescens_downregulated
WBPaper00035227:heat_shock_regulated
WBPaper00036286:Pattern_D
WBPaper00036464:S.aureus-RN6390_regulated
WBPaper00038172:tax-6null_up_regulated
WBPaper00040210:Diazinon_24C_regulated
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_regulated_aging
WBPaper00040858:eQTL_regulated_reproductive
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_24h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00045015:nhr-25(RNAi)_downregulated
WBPaper00046548:dafachronic-acid_downregulated
WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
[cgc6390]:male_soma-enriched
InteractionWBInteraction000214171
WBInteraction000311081
WBInteraction000448672
Map_infoPositivePositive_cloneC17B7Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV-12.1331
MethodGene