WormBase Tree Display for Gene: WBGene00015789
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WBGene00015789 | SMap | S_parent | Sequence | C15C7 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | syx-6 | Person_evidence | WBPerson3132 | |||
Sequence_name | C15C7.1 | ||||||
Molecular_name | C15C7.1 | ||||||
C15C7.1.1 | |||||||
CE30865 | |||||||
Other_name | CELE_C15C7.1 | Accession_evidence | NDB | BX284606 | |||
Public_name | syx-6 | ||||||
DB_info | Database | AceView | gene | XD783 | |||
WormQTL | gene | WBGene00015789 | |||||
WormFlux | gene | WBGene00015789 | |||||
NDB | locus_tag | CELE_C15C7.1 | |||||
Panther | gene | CAEEL|WormBase=WBGene00015789|UniProtKB=P83528 | |||||
family | PTHR12791 | ||||||
NCBI | gene | 259698 | |||||
RefSeq | protein | NM_001392741.1 | |||||
SwissProt | UniProtAcc | P83528 | |||||
TREEFAM | TREEFAM_ID | TF313254 | |||||
UniProt_GCRP | UniProtAcc | P83528 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | syx | ||||||
Allele (20) | |||||||
Strain | WBStrain00001363 | ||||||
WBStrain00002195 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00048848 | ||||||
00048849 | |||||||
00048850 | |||||||
00048851 | |||||||
00048852 | |||||||
00048853 | |||||||
00048854 | |||||||
00048855 | |||||||
Contained_in_operon | CEOPX040 | ||||||
Ortholog (27) | |||||||
Paralog | WBGene00043064 | Caenorhabditis elegans | From_analysis | Panther | |||
Structured_description | Automated_description | Predicted to be involved in synaptic vesicle docking. Located in Golgi trans cisterna. Expressed in head. Is an ortholog of human STX10 (syntaxin 10). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C15C7.1 | |||||
Corresponding_transcript | C15C7.1.1 | ||||||
Other_sequence (25) | |||||||
Associated_feature | WBsf034315 | ||||||
WBsf662584 | |||||||
WBsf1004536 | |||||||
WBsf235456 | |||||||
Experimental_info | RNAi_result (4) | ||||||
Expr_pattern | Chronogram1446 | ||||||
Expr4832 | |||||||
Expr5267 | |||||||
Expr5268 | |||||||
Expr13818 | |||||||
Expr1025910 | |||||||
Expr1036755 | |||||||
Expr1144649 | |||||||
Expr2017196 | |||||||
Expr2035332 | |||||||
Drives_construct | WBCnstr00002253 | ||||||
WBCnstr00004271 | |||||||
WBCnstr00012263 | |||||||
WBCnstr00028567 | |||||||
Construct_product | WBCnstr00019191 | ||||||
WBCnstr00028567 | |||||||
WBCnstr00040136 | |||||||
Microarray_results (13) | |||||||
Expression_cluster (82) | |||||||
Interaction (24) | |||||||
Map_info | Map | X | Position | -11.6777 | Error | 0.112361 | |
Positive | Positive_clone | C15C7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00010295 | ||||||
WBPaper00018596 | |||||||
WBPaper00030963 | |||||||
WBPaper00038491 | |||||||
WBPaper00055090 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |