WormBase Tree Display for Gene: WBGene00015745
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WBGene00015745 | SMap | S_parent | Sequence | C13F10 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | Sequence_name | C13F10.6 | |||||||
Molecular_name | C13F10.6 | ||||||||
C13F10.6.1 | |||||||||
CE08147 | |||||||||
Other_name | CELE_C13F10.6 | Accession_evidence | NDB | BX284605 | |||||
Public_name | C13F10.6 | ||||||||
DB_info | Database | AceView | gene | 5H700 | |||||
WormQTL | gene | WBGene00015745 | |||||||
WormFlux | gene | WBGene00015745 | |||||||
NDB | locus_tag | CELE_C13F10.6 | |||||||
NCBI | gene | 182579 | |||||||
RefSeq | protein | NM_072429.4 | |||||||
TREEFAM | TREEFAM_ID | TF318226 | |||||||
TrEMBL | UniProtAcc | O01487 | |||||||
UniProt_GCRP | UniProtAcc | O01487 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 02 Mar 2018 10:40:20 | WBPerson4025 | Event | Split_into | WBGene00303039 | ||||
Split_into | WBGene00303039 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (33) | |||||||||
RNASeq_FPKM (74) | |||||||||
Contained_in_operon | CEOP5144 | ||||||||
Ortholog | WBGene00038376 | Caenorhabditis briggsae | From_analysis | Hillier-set | |||||
OrthoMCL | |||||||||
OMA | |||||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00071822 | Caenorhabditis remanei | From_analysis | OMA | ||||||
TreeFam | |||||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00148657 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
TreeFam | |||||||||
Inparanoid_8 | |||||||||
WBGene00124561 | Caenorhabditis japonica | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
CSP26.g17890 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
CSP28.g1927 | Caenorhabditis panamensis | From_analysis | WormBase-Compara | ||||||
CSP29.g6602 | Caenorhabditis becei | From_analysis | WormBase-Compara | ||||||
CSP32.g7175 | Caenorhabditis sulstoni | From_analysis | WormBase-Compara | ||||||
CSP39.g10816 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
CSP39.g22782 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
CSP39.g22939 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
CSP40.g21476 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||||
Cni-C13F10.6 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
Csp11.Scaffold629.g15415 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
Csp5_scaffold_02620.g27263 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
FL83_09721 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
GCK72_017328 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
Sp34_50226900 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
chrV_pilon.g14626 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Enriched in several structures, including cephalic sheath cell; ciliated neurons; germ line; pharyngeal cell; and rectal epithelial cell based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including dpy-10; hsf-1; and pgl-1 based on microarray and RNA-seq studies. Is affected by fourteen chemicals including rotenone; manganese chloride; and D-glucose based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Leucine-rich repeat domain superfamily. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C13F10.6 | |||||||
Corresponding_CDS_history | C13F10.6a:wp264 | ||||||||
C13F10.6b:wp264 | |||||||||
Corresponding_transcript | C13F10.6.1 | ||||||||
Other_sequence | CBC15291_1 | ||||||||
CBC01008_1 | |||||||||
Associated_feature | WBsf652762 | ||||||||
WBsf233922 | |||||||||
WBsf233923 | |||||||||
Experimental_info | RNAi_result | WBRNAi00028849 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00040451 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00007803 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00077814 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1018476 | ||||||||
Expr1036737 | |||||||||
Expr1144517 | |||||||||
Expr2000749 | |||||||||
Expr2018968 | |||||||||
Drives_construct | WBCnstr00028601 | ||||||||
Construct_product | WBCnstr00028601 | ||||||||
Microarray_results (21) | |||||||||
Expression_cluster (128) | |||||||||
Interaction (87) | |||||||||
Map_info | Positive | Positive_clone | C13F10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | V | 0.634795 | |||||||
Method | Gene |