WormBase Tree Display for Gene: WBGene00015680

WBGene00015680 SMap: S_parent: Sequence: CHROMOSOME_IV
  Identity: Version: 2
    Name: CGC_name: egal-1 Person_evidence: WBPerson622
      Sequence_name: C10G6.1
      Molecular_name: C10G6.1a
        C10G6.1a.1
        CE27677
        C10G6.1b
        CE37193
        C10G6.1b.1
      Other_name: CELE_C10G6.1 Accession_evidence: NDB BX284604
      Public_name: egal-1
    DB_info: Database: AceView gene 4G593
        WormQTL gene WBGene00015680
        WormFlux gene WBGene00015680
        NDB locus_tag CELE_C10G6.1
        Panther gene CAEEL|WormBase=WBGene00015680|UniProtKB=Q17902
          family PTHR46628
        NCBI gene 177352
        RefSeq protein NM_001026153.3
            NM_001026152.6
        SwissProt UniProtAcc Q17902
        TREEFAM TREEFAM_ID TF315023
        UniProt_GCRP UniProtAcc Q17902
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 26 Jan 2009 11:41:11 WBPerson2970 Name_change: CGC_name: egal-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: egal
    Allele (49)
    RNASeq_FPKM (74)
    GO_annotation (11)
    Ortholog (35)
    Paralog: WBGene00000796 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00013256 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable 3'-5' exonuclease activity and nucleic acid binding activity. Predicted to be involved in piRNA processing. Predicted to be located in nuclear envelope. Predicted to be part of PET complex. Is an ortholog of human EXD1 (exonuclease 3'-5' domain containing 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C10G6.1a
      C10G6.1b
    Corresponding_CDS_history: C10G6.1:wp129
    Corresponding_transcript: C10G6.1a.1
      C10G6.1b.1
    Other_sequence (66)
    Associated_feature (15)
  Experimental_info: RNAi_result: WBRNAi00024525 Inferred_automatically: RNAi_primary
      WBRNAi00082930 Inferred_automatically: RNAi_primary
      WBRNAi00040318 Inferred_automatically: RNAi_primary
      WBRNAi00082901 Inferred_automatically: RNAi_primary
      WBRNAi00082929 Inferred_automatically: RNAi_primary
      WBRNAi00082931 Inferred_automatically: RNAi_primary
      WBRNAi00010605 Inferred_automatically: RNAi_primary
      WBRNAi00027168 Inferred_automatically: RNAi_primary
      WBRNAi00028790 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1029130
      Expr1036712
      Expr1144391
      Expr2011196
      Expr2029432
    Drives_construct: WBCnstr00028659
    Construct_product: WBCnstr00028659
    Microarray_results (27)
    Expression_cluster (171)
    Interaction (23)
  Map_info: Map: IV Position: 2.4289
    Positive: Positive_clone: C10G6 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00035598
    WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene