WormBase Tree Display for Gene: WBGene00015523
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| WBGene00015523 | SMap | S_parent | Sequence | C06E1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ztf-30 | Person_evidence | WBPerson260 | |||||
| WBPerson1997 | |||||||||
| Sequence_name | C06E1.8 | ||||||||
| Molecular_name | C06E1.8 | ||||||||
| C06E1.8.1 | |||||||||
| CE00063 | |||||||||
| Other_name | CELE_C06E1.8 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | ztf-30 | ||||||||
| DB_info | Database | AceView | gene | 3J686 | |||||
| WormQTL | gene | WBGene00015523 | |||||||
| WormFlux | gene | WBGene00015523 | |||||||
| NDB | locus_tag | CELE_C06E1.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015523|UniProtKB=P34303 | |||||||
| family | PTHR24408 | ||||||||
| NCBI | gene | 182317 | |||||||
| RefSeq | protein | NM_066491.5 | |||||||
| SwissProt | UniProtAcc | P34303 | |||||||
| TREEFAM | TREEFAM_ID | TF317235 | |||||||
| UniProt_GCRP | UniProtAcc | P34303 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 16 Apr 2010 14:03:06 | WBPerson2970 | Name_change | CGC_name | ztf-30 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ztf | ||||||||
| Allele (44) | |||||||||
| Strain | WBStrain00037257 | ||||||||
| WBStrain00037498 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00041491 | ||||||||
| 00041492 | |||||||||
| 00041493 | |||||||||
| 00041494 | |||||||||
| 00041495 | |||||||||
| 00041496 | |||||||||
| 00041497 | |||||||||
| 00041498 | |||||||||
| Ortholog (26) | |||||||||
| Paralog (17) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C06E1.8 | |||||||
| Corresponding_transcript | C06E1.8.1 | ||||||||
| Other_sequence | ACC25399_1 | ||||||||
| EX539676.1 | |||||||||
| CJC13736_1 | |||||||||
| Associated_feature (13) | |||||||||
| Transcription_factor | WBTranscriptionFactor000483 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00005468 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00010307 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039897 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024575 | ||||||||
| Expr1036645 | |||||||||
| Expr1143974 | |||||||||
| Expr1200328 | |||||||||
| Expr2018201 | |||||||||
| Expr2036339 | |||||||||
| Drives_construct | WBCnstr00028780 | ||||||||
| Construct_product | WBCnstr00016783 | ||||||||
| WBCnstr00028780 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (167) | |||||||||
| Interaction (37) | |||||||||
| Map_info | Map | III | Position | -0.229 | Error | 0.002397 | |||
| Positive | Positive_clone | C06E1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027309 | ||||||||
| WBPaper00061738 | |||||||||
| WBPaper00063926 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
