WormBase Tree Display for Gene: WBGene00015515
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| WBGene00015515 | SMap | S_parent | Sequence | C06A8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | spdl-1 | Person_evidence | WBPerson1836 | |||||
| Sequence_name | C06A8.5 | ||||||||
| Molecular_name | C06A8.5 | ||||||||
| C06A8.5.1 | |||||||||
| CE02456 | |||||||||
| Other_name | CELE_C06A8.5 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | spdl-1 | ||||||||
| DB_info | Database | AceView | gene | 2I73 | |||||
| WormQTL | gene | WBGene00015515 | |||||||
| WormFlux | gene | WBGene00015515 | |||||||
| NDB | locus_tag | CELE_C06A8.5 | |||||||
| NCBI | gene | 174256 | |||||||
| RefSeq | protein | NM_063236.7 | |||||||
| SwissProt | UniProtAcc | Q17695 | |||||||
| UniProt_GCRP | UniProtAcc | Q17695 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 11 Jan 2008 11:42:45 | WBPerson2970 | Name_change | CGC_name | spdl-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | spdl | ||||||||
| Allele (26) | |||||||||
| Strain | WBStrain00036279 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00058931 | ||||||||
| 00058932 | |||||||||
| 00058933 | |||||||||
| 00058934 | |||||||||
| 00058935 | |||||||||
| 00058936 | |||||||||
| 00058937 | |||||||||
| 00058938 | |||||||||
| 00058939 | |||||||||
| 00058940 | |||||||||
| 00058941 | |||||||||
| 00058942 | |||||||||
| 00058943 | |||||||||
| 00058944 | |||||||||
| 00058945 | |||||||||
| 00058946 | |||||||||
| 00058947 | |||||||||
| 00058948 | |||||||||
| 00058949 | |||||||||
| 00058950 | |||||||||
| 00058951 | |||||||||
| 00058952 | |||||||||
| 00058953 | |||||||||
| 00058954 | |||||||||
| 00058955 | |||||||||
| 00058956 | |||||||||
| 00058957 | |||||||||
| 00058958 | |||||||||
| 00058959 | |||||||||
| 00058960 | |||||||||
| 00058961 | |||||||||
| 00058962 | |||||||||
| 00058963 | |||||||||
| 00058964 | |||||||||
| 00058965 | |||||||||
| 00058966 | |||||||||
| Ortholog (23) | |||||||||
| Structured_description | Concise_description | spdl-1 encodes a coiled-coil protein; RNAi screens indicate that spdl-1 activity is required for proper chromosome segregation, embryonic development, body morphology, and normal growth rates. | Paper_evidence | WBPaper00005654 | |||||
| WBPaper00006395 | |||||||||
| WBPaper00024497 | |||||||||
| WBPaper00025054 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 28 May 2010 00:00:00 | ||||||||
| Automated_description | Involved in several processes, including chromosome localization; positive regulation of kinetochore assembly; and regulation of chromosome segregation. Located in kinetochore and microtubule. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C06A8.5 | |||||||
| Corresponding_transcript | C06A8.5.1 | ||||||||
| Other_sequence | CR12194 | ||||||||
| CBC05118_1 | |||||||||
| CR00752 | |||||||||
| CRC04741_1 | |||||||||
| Associated_feature | WBsf654893 | ||||||||
| WBsf657873 | |||||||||
| WBsf657874 | |||||||||
| WBsf221639 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00028546 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00039839 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00072904 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00071781 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00008351 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00071167 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039840 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00072903 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00024484 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr8364 | ||||||||
| Expr8383 | |||||||||
| Expr1028423 | |||||||||
| Expr1036642 | |||||||||
| Expr1143918 | |||||||||
| Expr2016028 | |||||||||
| Expr2034263 | |||||||||
| Drives_construct | WBCnstr00018546 | ||||||||
| WBCnstr00018547 | |||||||||
| WBCnstr00018548 | |||||||||
| WBCnstr00018549 | |||||||||
| WBCnstr00018550 | |||||||||
| WBCnstr00018551 | |||||||||
| WBCnstr00018977 | |||||||||
| WBCnstr00028787 | |||||||||
| Construct_product | WBCnstr00000922 | ||||||||
| WBCnstr00005329 | |||||||||
| WBCnstr00018546 | |||||||||
| WBCnstr00018547 | |||||||||
| WBCnstr00018548 | |||||||||
| WBCnstr00018549 | |||||||||
| WBCnstr00018551 | |||||||||
| WBCnstr00018977 | |||||||||
| WBCnstr00028787 | |||||||||
| Antibody | WBAntibody00001458 | ||||||||
| WBAntibody00001476 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (158) | |||||||||
| Interaction (50) | |||||||||
| Map_info | Map | II | Position | 0.562983 | Error | 0.000403 | |||
| Positive | Positive_clone | C06A8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00032153 | ||||||||
| WBPaper00032281 | |||||||||
| WBPaper00044471 | |||||||||
| WBPaper00046407 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
