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WormBase Tree Display for Gene: WBGene00015419

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Name Class

WBGene00015419SMapS_parentSequenceC04E6
IdentityVersion2
NameCGC_namesrsx-18Person_evidenceWBPerson522
Sequence_nameC04E6.2
Molecular_nameC04E6.2
C04E6.2.1
CE07907
Other_nameCELE_C04E6.2Accession_evidenceNDBBX284605
Public_namesrsx-18
DB_infoDatabaseAceViewgene5G403
WormQTLgeneWBGene00015419
WormFluxgeneWBGene00015419
NDBlocus_tagCELE_C04E6.2
PanthergeneCAEEL|WormBase=WBGene00015419|UniProtKB=O01473
familyPTHR23360
NCBIgene182200
RefSeqproteinNM_072142.2
TREEFAMTREEFAM_IDTF316033
TrEMBLUniProtAccO01473
UniProt_GCRPUniProtAccO01473
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:56WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
202 Mar 2005 15:19:58WBPerson2970Name_changeCGC_namesrsx-18
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsrsx
Allele (36)
RNASeq_FPKM (74)
GO_annotation00024697
00121343
00121344
00121345
Ortholog (27)
ParalogWBGene00008247Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008248Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008249Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008250Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008251Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008552Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008982Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00009566Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00009999Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00010800Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00010802Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00010979Caenorhabditis elegansFrom_analysisPanther
WBGene00011084Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00011837Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011931Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WBGene00012054Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012055Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00013375Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00013398Caenorhabditis elegansFrom_analysisPanther
WBGene00015401Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00022404Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00022408Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00016543Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00044125Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00015738Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00018180Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00022405Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00019032Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00017845Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00044117Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00015737Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00022406Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00018709Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00015736Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00044124Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00017615Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00022655Caenorhabditis elegansFrom_analysisPanther
WBGene00018323Caenorhabditis elegansFrom_analysisPanther
WBGene00021953Caenorhabditis elegansFrom_analysisPanther
WBGene00021490Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00016248Caenorhabditis elegansFrom_analysisPanther
WBGene00019369Caenorhabditis elegansFrom_analysisPanther
WBGene00017278Caenorhabditis elegansFrom_analysisPanther
WBGene00016175Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionAutomated_descriptionPredicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Expressed in linker cell.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC04E6.2
Corresponding_transcriptC04E6.2.1
Other_sequenceFG647746.1
FG647772.1
Experimental_infoRNAi_resultWBRNAi00039606Inferred_automaticallyRNAi_primary
WBRNAi00092880Inferred_automaticallyRNAi_primary
WBRNAi00010119Inferred_automaticallyRNAi_primary
WBRNAi00028428Inferred_automaticallyRNAi_primary
Expr_patternExpr11150
Expr1026674
Expr1143707
Expr2016625
Expr2034815
Drives_constructWBCnstr00018188
WBCnstr00028862
Construct_productWBCnstr00028862
Microarray_results (16)
Expression_cluster (54)
Interaction (288)
Map_infoMapVPosition-0.771659Error0.001902
PositivePositive_cloneC04E6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00035477
WBPaper00041549
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene