WormBase Tree Display for Gene: WBGene00022408
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| WBGene00022408 | SMap | S_parent | Sequence | Y97E10B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | srsx-3 | Person_evidence | WBPerson522 | |||||
| Sequence_name | Y97E10B.9 | ||||||||
| Molecular_name | Y97E10B.9 | ||||||||
| Y97E10B.9.1 | |||||||||
| CE26329 | |||||||||
| Other_name | CELE_Y97E10B.9 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | srsx-3 | ||||||||
| DB_info | Database | AceView | gene | 5I414 | |||||
| WormQTL | gene | WBGene00022408 | |||||||
| WormFlux | gene | WBGene00022408 | |||||||
| NDB | locus_tag | CELE_Y97E10B.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00022408|UniProtKB=Q965R3 | |||||||
| family | PTHR23360 | ||||||||
| NCBI | gene | 190823 | |||||||
| RefSeq | protein | NM_072640.1 | |||||||
| TREEFAM | TREEFAM_ID | TF316033 | |||||||
| TrEMBL | UniProtAcc | Q965R3 | |||||||
| UniProt_GCRP | UniProtAcc | Q965R3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 02 Mar 2005 15:19:58 | WBPerson2970 | Name_change | CGC_name | srsx-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srsx | ||||||||
| Allele (19) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00090569 | ||||||||
| 00090570 | |||||||||
| 00090571 | |||||||||
| 00090572 | |||||||||
| 00090573 | |||||||||
| 00126535 | |||||||||
| 00126536 | |||||||||
| 00126537 | |||||||||
| Ortholog (26) | |||||||||
| Paralog (44) | |||||||||
| Structured_description | Automated_description | Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Located in non-motile cilium. Expressed in AWBL; AWBR; AWC-OFF; AWCL; and AWCR. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y97E10B.9 | |||||||
| Corresponding_transcript | Y97E10B.9.1 | ||||||||
| Other_sequence | Tcir_isotig07821 | ||||||||
| Associated_feature | WBsf047507 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00058693 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00022503 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr11095 | ||||||||
| Expr12697 | |||||||||
| Expr13174 | |||||||||
| Expr15422 | |||||||||
| Expr1022621 | |||||||||
| Expr1162112 | |||||||||
| Expr2016643 | |||||||||
| Expr2034831 | |||||||||
| Marker91 | |||||||||
| Drives_construct | WBCnstr00005558 | ||||||||
| WBCnstr00007709 | |||||||||
| WBCnstr00018164 | |||||||||
| WBCnstr00018719 | |||||||||
| WBCnstr00021137 | |||||||||
| WBCnstr00024246 | |||||||||
| Construct_product | WBCnstr00018164 | ||||||||
| WBCnstr00024246 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (29) | |||||||||
| Map_info | Map | V | Position | 0.965522 | Error | 0.002014 | |||
| Positive | Positive_clone | Y97E10B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00024671 | ||||||||
| WBPaper00028910 | |||||||||
| WBPaper00030504 | |||||||||
| WBPaper00031175 | |||||||||
| WBPaper00032896 | |||||||||
| WBPaper00044991 | |||||||||
| WBPaper00056672 | |||||||||
| WBPaper00059878 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
