WormBase Tree Display for Gene: WBGene00015392
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| WBGene00015392 | SMap | S_parent | Sequence | C03G5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nspc-7 | Person_evidence | WBPerson655 | |||||
| Sequence_name | C03G5.2 | ||||||||
| Molecular_name | C03G5.2 | ||||||||
| C03G5.2.1 | |||||||||
| CE30124 | |||||||||
| Other_name | CELE_C03G5.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | nspc-7 | ||||||||
| DB_info | Database | AceView | gene | XJ161 | |||||
| WormQTL | gene | WBGene00015392 | |||||||
| WormFlux | gene | WBGene00015392 | |||||||
| NDB | locus_tag | CELE_C03G5.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015392|UniProtKB=Q8WQG6 | |||||||
| family | PTHR31330 | ||||||||
| NCBI | gene | 181107 | |||||||
| RefSeq | protein | NM_171744.7 | |||||||
| TREEFAM | TREEFAM_ID | TF318876 | |||||||
| TrEMBL | UniProtAcc | Q8WQG6 | |||||||
| UniProt_GCRP | UniProtAcc | Q8WQG6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 18 May 2005 14:07:22 | WBPerson2970 | Name_change | CGC_name | nspc-7 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nspc | ||||||||
| Allele | WBVar01499963 | ||||||||
| WBVar01499781 | |||||||||
| WBVar01500168 | |||||||||
| WBVar01500169 | |||||||||
| WBVar01499642 | |||||||||
| WBVar01498960 | |||||||||
| WBVar01500067 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (259) | |||||||||
| Paralog (17) | |||||||||
| Structured_description | Automated_description | Enriched in excretory duct; excretory gland cell; and excretory pore based on single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on RNA-seq; microarray; and tiling array studies. Is affected by seventeen chemicals including Ethanol; rotenone; and mianserin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C03G5.2 | |||||||
| Corresponding_transcript | C03G5.2.1 | ||||||||
| Associated_feature | WBsf1006185 | ||||||||
| WBsf1006186 | |||||||||
| WBsf236059 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00039534 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00047106 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1143638 | ||||||||
| Expr2014475 | |||||||||
| Expr2032715 | |||||||||
| Drives_construct | WBCnstr00028880 | ||||||||
| Construct_product | WBCnstr00028880 | ||||||||
| Microarray_results | A_12_P118934 | ||||||||
| A_12_P135290 | |||||||||
| GPL3518_CE30124 | |||||||||
| GPL8304_CE_WBGene00015392_A | |||||||||
| GPL8304_CE_WBGene00015392_B | |||||||||
| GPL8673_C03G5_2P00246 | |||||||||
| GPL9450_C03G5.2 | |||||||||
| cea2.d.10305 | |||||||||
| Expression_cluster (118) | |||||||||
| Map_info | Map | X | Position | 0.101343 | |||||
| Positive | Positive_clone | C03G5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00064841 | ||||||||
| WBPaper00065331 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
