WormBase Tree Display for Gene: WBGene00015392
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WBGene00015392 | SMap | S_parent | Sequence | C03G5 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | nspc-7 | Person_evidence | WBPerson655 | |||
Sequence_name | C03G5.2 | ||||||
Molecular_name | C03G5.2 | ||||||
C03G5.2.1 | |||||||
CE30124 | |||||||
Other_name | CELE_C03G5.2 | Accession_evidence | NDB | BX284606 | |||
Public_name | nspc-7 | ||||||
DB_info | Database | AceView | gene | XJ161 | |||
WormQTL | gene | WBGene00015392 | |||||
WormFlux | gene | WBGene00015392 | |||||
NDB | locus_tag | CELE_C03G5.2 | |||||
Panther | gene | CAEEL|WormBase=WBGene00015392|UniProtKB=Q8WQG6 | |||||
family | PTHR31330 | ||||||
NCBI | gene | 181107 | |||||
RefSeq | protein | NM_171744.7 | |||||
TREEFAM | TREEFAM_ID | TF318876 | |||||
TrEMBL | UniProtAcc | Q8WQG6 | |||||
UniProt_GCRP | UniProtAcc | Q8WQG6 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | nspc | ||||||
Allele | WBVar01499963 | ||||||
WBVar01499781 | |||||||
WBVar01500168 | |||||||
WBVar01500169 | |||||||
WBVar01499642 | |||||||
WBVar01498960 | |||||||
WBVar01500067 | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (259) | |||||||
Paralog (17) | |||||||
Structured_description | Automated_description | Enriched in excretory duct; excretory gland cell; and excretory pore based on single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on RNA-seq; microarray; and tiling array studies. Is affected by seventeen chemicals including Ethanol; rotenone; and mianserin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C03G5.2 | |||||
Corresponding_transcript | C03G5.2.1 | ||||||
Associated_feature | WBsf1006185 | ||||||
WBsf1006186 | |||||||
WBsf236059 | |||||||
Experimental_info | RNAi_result | WBRNAi00039534 | Inferred_automatically | RNAi_primary | |||
WBRNAi00047106 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1143638 | ||||||
Expr2014475 | |||||||
Expr2032715 | |||||||
Drives_construct | WBCnstr00028880 | ||||||
Construct_product | WBCnstr00028880 | ||||||
Microarray_results | A_12_P118934 | ||||||
A_12_P135290 | |||||||
GPL3518_CE30124 | |||||||
GPL8304_CE_WBGene00015392_A | |||||||
GPL8304_CE_WBGene00015392_B | |||||||
GPL8673_C03G5_2P00246 | |||||||
GPL9450_C03G5.2 | |||||||
cea2.d.10305 | |||||||
Expression_cluster (118) | |||||||
Map_info | Map | X | Position | 0.101343 | |||
Positive | Positive_clone | C03G5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00064841 | ||||||
WBPaper00065331 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |