WormBase Tree Display for Gene: WBGene00015349
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| WBGene00015349 | SMap | S_parent | Sequence | C02F5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | henn-1 | Paper_evidence | WBPaper00041023 | |||||
| WBPaper00041020 | |||||||||
| Person_evidence | WBPerson1159 | ||||||||
| Sequence_name | C02F5.6 | ||||||||
| Molecular_name | C02F5.6b | ||||||||
| C02F5.6a | |||||||||
| CE51509 | |||||||||
| C02F5.6b.1 | |||||||||
| Other_name | CELE_C02F5.6 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | henn-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 11 May 2012 16:05:19 | WBPerson2970 | Name_change | CGC_name | henn-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | henn | ||||||||
| Allele (24) | |||||||||
| Strain | WBStrain00026603 | ||||||||
| WBStrain00026613 | |||||||||
| WBStrain00026606 | |||||||||
| WBStrain00026604 | |||||||||
| WBStrain00026614 | |||||||||
| WBStrain00026611 | |||||||||
| WBStrain00026605 | |||||||||
| WBStrain00026601 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (35) | |||||||||
| Contained_in_operon | CEOP3488 | ||||||||
| Ortholog (25) | |||||||||
| Structured_description | Automated_description | Enables small RNA 2'-O-methyltransferase activity. Involved in RNA methylation; piRNA processing; and siRNA processing. Located in nucleoplasm and perinuclear region of cytoplasm. Expressed in germ line and somatic cell. Is an ortholog of human HENMT1 (HEN methyltransferase 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C02F5.6b | |||||||
| Corresponding_CDS_history | C02F5.6a:wp252 | ||||||||
| C02F5.6b:wp252 | |||||||||
| Corresponding_transcript | C02F5.6a | ||||||||
| C02F5.6b.1 | |||||||||
| Other_sequence | Dviv_isotig16619 | ||||||||
| TM01003 | |||||||||
| CBC12816_1 | |||||||||
| Tcol_isotig15445 | |||||||||
| TMC00300_1 | |||||||||
| Associated_feature | WBsf645398 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00039457 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00005875 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039456 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00028360 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr10044 | ||||||||
| Expr10533 | |||||||||
| Expr1018239 | |||||||||
| Expr1036575 | |||||||||
| Expr1143566 | |||||||||
| Expr2012398 | |||||||||
| Expr2030634 | |||||||||
| Drives_construct | WBCnstr00015520 | ||||||||
| WBCnstr00028912 | |||||||||
| Construct_product | WBCnstr00014579 | ||||||||
| WBCnstr00014580 | |||||||||
| WBCnstr00015520 | |||||||||
| WBCnstr00028912 | |||||||||
| Regulate_expr_cluster | WBPaper00058942:henn-1(pk2295)_downregulated | ||||||||
| WBPaper00058942:henn-1(pk2295)_upregulated | |||||||||
| Antibody | WBAntibody00002334 | ||||||||
| WBAntibody00002377 | |||||||||
| Microarray_results (30) | |||||||||
| Expression_cluster (80) | |||||||||
| Interaction | WBInteraction000518834 | ||||||||
| WBInteraction000563929 | |||||||||
| WBInteraction000573806 | |||||||||
| WBInteraction000574378 | |||||||||
| Map_info | Map | III | Position | -0.356135 | |||||
| Positive | Positive_clone | C02F5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (14) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
