WormBase Tree Display for Gene: WBGene00015349
expand all nodes | collapse all nodes | view schema
WBGene00015349 | SMap | S_parent | Sequence | C02F5 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | henn | |||||
Allele (24) | ||||||
Strain | WBStrain00026603 | |||||
WBStrain00026613 | ||||||
WBStrain00026606 | ||||||
WBStrain00026604 | ||||||
WBStrain00026614 | ||||||
WBStrain00026611 | ||||||
WBStrain00026605 | ||||||
WBStrain00026601 | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation (35) | ||||||
Contained_in_operon | CEOP3488 | |||||
Ortholog (25) | ||||||
Structured_description | Automated_description | Enables small RNA 2'-O-methyltransferase activity. Involved in RNA methylation; piRNA processing; and siRNA processing. Located in nucleoplasm and perinuclear region of cytoplasm. Expressed in germ line and somatic cell. Is an ortholog of human HENMT1 (HEN methyltransferase 1). | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | C02F5.6b | ||||
Corresponding_CDS_history | C02F5.6a:wp252 | |||||
C02F5.6b:wp252 | ||||||
Corresponding_transcript | C02F5.6a | |||||
C02F5.6b.1 | ||||||
Other_sequence | Dviv_isotig16619 | |||||
TM01003 | ||||||
CBC12816_1 | ||||||
Tcol_isotig15445 | ||||||
TMC00300_1 | ||||||
Associated_feature | WBsf645398 | |||||
Experimental_info | RNAi_result | WBRNAi00039457 | Inferred_automatically | RNAi_primary | ||
WBRNAi00005875 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00039456 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00028360 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr10044 | |||||
Expr10533 | ||||||
Expr1018239 | ||||||
Expr1036575 | ||||||
Expr1143566 | ||||||
Expr2012398 | ||||||
Expr2030634 | ||||||
Drives_construct | WBCnstr00015520 | |||||
WBCnstr00028912 | ||||||
Construct_product | WBCnstr00014579 | |||||
WBCnstr00014580 | ||||||
WBCnstr00015520 | ||||||
WBCnstr00028912 | ||||||
Regulate_expr_cluster | WBPaper00058942:henn-1(pk2295)_downregulated | |||||
WBPaper00058942:henn-1(pk2295)_upregulated | ||||||
Antibody | WBAntibody00002334 | |||||
WBAntibody00002377 | ||||||
Microarray_results (30) | ||||||
Expression_cluster (80) | ||||||
Interaction | WBInteraction000518834 | |||||
WBInteraction000563929 | ||||||
WBInteraction000573806 | ||||||
WBInteraction000574378 | ||||||
Map_info | Map | III | Position | -0.356135 | ||
Positive | Positive_clone | C02F5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Pseudo_map_position | ||||||
Reference (14) | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |