WormBase Tree Display for Gene: WBGene00015348
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| WBGene00015348 | SMap | S_parent | Sequence | C02F5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C02F5.5 | |||||||
| Molecular_name | C02F5.5 | ||||||||
| C02F5.5.1 | |||||||||
| CE00041 | |||||||||
| Other_name | CELE_C02F5.5 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | C02F5.5 | ||||||||
| DB_info | Database | AceView | gene | 3J325 | |||||
| WormQTL | gene | WBGene00015348 | |||||||
| WormFlux | gene | WBGene00015348 | |||||||
| NDB | locus_tag | CELE_C02F5.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015348|UniProtKB=P34282 | |||||||
| family | PTHR36940 | ||||||||
| NCBI | gene | 182122 | |||||||
| RefSeq | protein | NM_066401.3 | |||||||
| SwissProt | UniProtAcc | P34282 | |||||||
| TREEFAM | TREEFAM_ID | TF317018 | |||||||
| UniProt_GCRP | UniProtAcc | P34282 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar01500260 | ||||||||
| WBVar01499774 | |||||||||
| WBVar01838190 | |||||||||
| WBVar01499061 | |||||||||
| WBVar00843612 | |||||||||
| WBVar00843613 | |||||||||
| WBVar00843614 | |||||||||
| WBVar00843615 | |||||||||
| WBVar00403036 | |||||||||
| WBVar02132358 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (19) | |||||||||
| Paralog | WBGene00011026 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00017542 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021398 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including germ line; interneuron; intestine; sperm; and tail hypodermis based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and dpy-10 based on microarray and RNA-seq studies. Is affected by twenty-six chemicals including Ethanol; nicotinic acid; and methylmercuric chloride based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: DUF236 repeat. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C02F5.5 | |||||||
| Corresponding_transcript | C02F5.5.1 | ||||||||
| Other_sequence | CR09688 | ||||||||
| CR09689 | |||||||||
| CBC03971_1 | |||||||||
| CRC04719_1 | |||||||||
| Associated_feature | WBsf225376 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00028359 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00010014 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005532 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039455 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039448 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019515 | ||||||||
| Expr1143565 | |||||||||
| Expr2000342 | |||||||||
| Expr2018566 | |||||||||
| Drives_construct | WBCnstr00028913 | ||||||||
| Construct_product | WBCnstr00028913 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (205) | |||||||||
| Interaction (123) | |||||||||
| Map_info | Positive | Positive_clone | C02F5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -0.355936 | |||||||
| Method | Gene |
