WormBase Tree Display for Gene: WBGene00015348
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WBGene00015348 | SMap | S_parent | Sequence | C02F5 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | C02F5.5 | |||||||
Molecular_name | C02F5.5 | ||||||||
C02F5.5.1 | |||||||||
CE00041 | |||||||||
Other_name | CELE_C02F5.5 | Accession_evidence | NDB | BX284603 | |||||
Public_name | C02F5.5 | ||||||||
DB_info | Database | AceView | gene | 3J325 | |||||
WormQTL | gene | WBGene00015348 | |||||||
WormFlux | gene | WBGene00015348 | |||||||
NDB | locus_tag | CELE_C02F5.5 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00015348|UniProtKB=P34282 | |||||||
family | PTHR36940 | ||||||||
NCBI | gene | 182122 | |||||||
RefSeq | protein | NM_066401.3 | |||||||
SwissProt | UniProtAcc | P34282 | |||||||
TREEFAM | TREEFAM_ID | TF317018 | |||||||
UniProt_GCRP | UniProtAcc | P34282 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele | WBVar01500260 | ||||||||
WBVar01499774 | |||||||||
WBVar01838190 | |||||||||
WBVar01499061 | |||||||||
WBVar00843612 | |||||||||
WBVar00843613 | |||||||||
WBVar00843614 | |||||||||
WBVar00843615 | |||||||||
WBVar00403036 | |||||||||
WBVar02132358 | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (19) | |||||||||
Paralog | WBGene00011026 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00017542 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00021398 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Enriched in several structures, including germ line; interneuron; intestine; sperm; and tail hypodermis based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and dpy-10 based on microarray and RNA-seq studies. Is affected by twenty-six chemicals including Ethanol; nicotinic acid; and methylmercuric chloride based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: DUF236 repeat. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C02F5.5 | |||||||
Corresponding_transcript | C02F5.5.1 | ||||||||
Other_sequence | CR09688 | ||||||||
CR09689 | |||||||||
CBC03971_1 | |||||||||
CRC04719_1 | |||||||||
Associated_feature | WBsf225376 | ||||||||
Experimental_info | RNAi_result | WBRNAi00028359 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00010014 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00005532 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00039455 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00039448 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1019515 | ||||||||
Expr1143565 | |||||||||
Expr2000342 | |||||||||
Expr2018566 | |||||||||
Drives_construct | WBCnstr00028913 | ||||||||
Construct_product | WBCnstr00028913 | ||||||||
Microarray_results | SMD_C02F5.5 | ||||||||
187390_at | |||||||||
A_12_P108091 | |||||||||
Aff_C02F5.5 | |||||||||
GPL13394_WBGene00015348 | |||||||||
GPL13914_C02F5.5 | |||||||||
GPL14144_C02F5.5_94-153_0.942_1_A | |||||||||
GPL19516_CGZ0002066 | |||||||||
GPL21109_C02F5.5 | |||||||||
GPL3518_CE00041 | |||||||||
GPL8304_CE_WBGene00015348_A | |||||||||
GPL8304_CE_WBGene00015348_B | |||||||||
GPL8673_C02F5_5P00026 | |||||||||
GPL8673_C02F5_5P00078 | |||||||||
GPL8673_C02F5_5P00333 | |||||||||
GPL9450_C02F5.5 | |||||||||
cea2.p.55777 | |||||||||
Expression_cluster (205) | |||||||||
Interaction (123) | |||||||||
Map_info | Positive | Positive_clone | C02F5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | III | -0.355936 | |||||||
Method | Gene |