WormBase Tree Display for Gene: WBGene00015344
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| WBGene00015344 | SMap | S_parent | Sequence | C02E11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nra-4 | Paper_evidence | WBPaper00034730 | |||||
| Person_evidence | WBPerson2633 | ||||||||
| Sequence_name | C02E11.1 | ||||||||
| Molecular_name | C02E11.1a | ||||||||
| C02E11.1a.1 | |||||||||
| CE28528 | |||||||||
| C02E11.1b | |||||||||
| CE32040 | |||||||||
| C02E11.1b.1 | |||||||||
| Other_name | CELE_C02E11.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nra-4 | ||||||||
| DB_info | Database | AceView | gene | 5B508C | |||||
| 5B508 | |||||||||
| WormQTL | gene | WBGene00015344 | |||||||
| WormFlux | gene | WBGene00015344 | |||||||
| NDB | locus_tag | CELE_C02E11.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015344|UniProtKB=H2KYE0 | |||||||
| family | PTHR23303 | ||||||||
| NCBI | gene | 3565008 | |||||||
| RefSeq | protein | NM_070966.4 | |||||||
| NM_182391.2 | |||||||||
| SwissProt | UniProtAcc | H2KYE0 | |||||||
| TREEFAM | TREEFAM_ID | TF313696 | |||||||
| UniProt_GCRP | UniProtAcc | H2KYE0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 18 Aug 2009 11:24:59 | WBPerson9133 | Name_change | CGC_name | nra-4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nra | ||||||||
| Allele (118) | |||||||||
| Strain | WBStrain00001345 | ||||||||
| WBStrain00001346 | |||||||||
| WBStrain00001684 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00021518 | ||||||||
| 00021519 | |||||||||
| 00021520 | |||||||||
| 00021521 | |||||||||
| 00021522 | |||||||||
| 00021523 | |||||||||
| 00021524 | |||||||||
| Ortholog (42) | |||||||||
| Structured_description | Automated_description | Involved in protein-containing complex assembly. Located in endoplasmic reticulum. Expressed in germ line; motor neurons; and non-striated muscle. Is an ortholog of human NOMO1 (NODAL modulator 1); NOMO2 (NODAL modulator 2); and NOMO3 (NODAL modulator 3). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C02E11.1a | |||||||
| C02E11.1b | |||||||||
| Corresponding_transcript | C02E11.1a.1 | ||||||||
| C02E11.1b.1 | |||||||||
| Other_sequence (43) | |||||||||
| Associated_feature | WBsf668733 | ||||||||
| WBsf999243 | |||||||||
| WBsf999244 | |||||||||
| WBsf999245 | |||||||||
| WBsf1019126 | |||||||||
| WBsf233312 | |||||||||
| WBsf233313 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00114652 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00028344 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039416 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00009989 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern (14) | |||||||||
| Drives_construct | WBCnstr00002238 | ||||||||
| WBCnstr00002239 | |||||||||
| WBCnstr00002508 | |||||||||
| WBCnstr00004266 | |||||||||
| WBCnstr00004364 | |||||||||
| WBCnstr00013430 | |||||||||
| WBCnstr00028916 | |||||||||
| Construct_product | WBCnstr00028916 | ||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (139) | |||||||||
| Interaction (143) | |||||||||
| Map_info | Map | V | Position | -19.8616 | Error | 0.001919 | |||
| Positive | Positive_clone | C02E11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00032165 | ||||||||
| WBPaper00034730 | |||||||||
| WBPaper00035364 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041771 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
