WormBase Tree Display for Gene: WBGene00015338

WBGene00015338 SMap: S_parent: Sequence: C02E7
  Identity: Version: 2
    Name: CGC_name: catp-2 Person_evidence: WBPerson61
      Sequence_name: C02E7.1
      Molecular_name: C02E7.1a
        C02E7.1a.1
        CE07838
        C02E7.1b
        CE51374
        C02E7.1b.1
      Other_name: CELE_C02E7.1 Accession_evidence: NDB BX284605
      Public_name: catp-2
    DB_info: Database: AceView gene 5F415
        WormQTL gene WBGene00015338
        WormFlux gene WBGene00015338
        NDB locus_tag CELE_C02E7.1
        Panther gene CAEEL|WormBase=WBGene00015338|UniProtKB=O16436
          family PTHR43294
        NCBI gene 182114
        RefSeq protein NM_001322555.1
            NM_071927.2
        TrEMBL UniProtAcc O16436
            A0A131MBN3
        UniProt_GCRP UniProtAcc O16436
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:55 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 21 Oct 2008 09:57:23 WBPerson2970 Name_change: CGC_name: catp-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: catp
    Allele (77)
    RNASeq_FPKM (74)
    GO_annotation (17)
    Ortholog (32)
    Paralog (14)
    Structured_description: Automated_description: Predicted to enable P-type sodium:potassium-exchanging transporter activity. Predicted to be involved in intracellular monoatomic cation homeostasis and monoatomic cation transmembrane transport. Predicted to be located in plasma membrane. Is an ortholog of human ATP12A (ATPase H+/K+ transporting non-gastric alpha2 subunit) and ATP4A (ATPase H+/K+ transporting subunit alpha). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:10534 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:819)
  Molecular_info: Corresponding_CDS: C02E7.1a
      C02E7.1b
    Corresponding_transcript: C02E7.1a.1
      C02E7.1b.1
    Other_sequence: JI462532.1
      JO470954.1
      BXC07339_1
    Associated_feature: WBsf661242
  Experimental_info: RNAi_result: WBRNAi00039417 Inferred_automatically: RNAi_primary
      WBRNAi00009990 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1012571
      Expr1143533
      Expr2027969
    Drives_construct: WBCnstr00028921
    Construct_product: WBCnstr00028921
    Microarray_results (18)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_upregulated
      WBPaper00032528:L3_depleted
      WBPaper00037950:dopaminergic-neurons_larva_enriched
      WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
      WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
      WBPaper00042215:wdr-23(tm1817)_upregulated
      WBPaper00044260:1-methylnicotinamide_upregulated
      WBPaper00044426:rotenone_5day_downregulated
      WBPaper00044578:reduced-humidity_downregulated_microarray
      WBPaper00045390:tunicamycin_upregulated
      WBPaper00045390:ubc-9(RNAi)_upregulated
      WBPaper00045571:germline-ablation_upregulated
      WBPaper00045774:clk-1_upregulated
      WBPaper00049098:heat-repressed_hrde-1(tm1200)
      WBPaper00049098:heat-repressed_N2
      WBPaper00049290:rsks-1(sv31)_upregulated
      WBPaper00049377:MWCNT_upregulated
      WBPaper00049635:dop-1(vs100)_upregulated
      WBPaper00049905:Age_variant_expression
      WBPaper00049920:Glucose-Diet_upregulated_hyl-2(tm2031)
      WBPaper00049920:Glucose-Diet_upregulated_N2
      WBPaper00049942:HeatShock_downregulated_hsf-1(RNAi)
      WBPaper00049942:hsf-1(RNAi)_downregulated
      WBPaper00050193:cec-4(ok3124)_upregulated_L1
      WBPaper00050370:dpy-21(e428)_L3_upregulated
      WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050801:DAF-12_dauer_regulome
      WBPaper00050801:DAF-16_dauer_regulome
      WBPaper00050801:DPY-21_dauer_regulome
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00051540:exc-7(csb29)_upregulated
      WBPaper00052884:emb-4(hc60)_upregulated
      WBPaper00053295:lin-22(ot269)_upregulated
      WBPaper00053318:Aging_upregulated_mRNA_N2
      WBPaper00053318:mir-71(n4115)_upregulated_mRNA
      WBPaper00053388:dauer_regulated_Cluster4
      WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_downregulated
      WBPaper00053606:N2_vs_elt-2(ca15)_downregulated
      WBPaper00053771:down_by_skn-1(RNAi)_at_dpy-7(e88)
      WBPaper00053771:up_at_24h-NaCl
      WBPaper00053771:up_at_dpy-7(e88)
      WBPaper00055013:spt-16(RNAi)_upregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Rapamycin-Metformin_upregulated
      WBPaper00055354:Rifampicin_upregulated
      WBPaper00055386:eat-2(ad465)_downregulated
      WBPaper00056284:ints-6(t1903)_upregulated
      WBPaper00056550:ceh-60(ok1485)_upregulated_AdultDay1
      WBPaper00056809:smn-1(ok355)_upregulated
      WBPaper00057068:Cadmium_upregulated
      WBPaper00058711:wdr-5(ok1417)_upregulated
      WBPaper00058955:heatshock_upregulated_CE
      WBPaper00059253:sucrose_downregulated
      WBPaper00059253:sucrose_stearic-acid_downregulated
      WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
      WBPaper00059987:Wounding_upregulated
      WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
      WBPaper00060434:pH4.33_vs_pH6.33_downrgulated
      WBPaper00060634:unc-120(st364)_downregulated
      WBPaper00061527:sre-33-ZK1025.1_8337
      WBPaper00061753:csr-1(tor159)_upregulated_25C
      WBPaper00061853:osm-3(dh441)_upregulated
      WBPaper00061853:osm-3(dh441)_upregulated_tunicamycin
      WBPaper00061853:tunicamycin_downregulated_N2
      WBPaper00062456:doxycycline_upregulated_CB4856_transcript
      WBPaper00062456:doxycycline_upregulated_N2_transcript
      WBPaper00062587:lsl-1(ljm1)_upregulated
      WBPaper00062587:lsl-1(tm4769)_upregulated
      WBPaper00063926:chd-7(gk290)_upregulated
      WBPaper00064005:starvation_upregulated_aptf-1(gk794)_protein
      WBPaper00065032:PAO1_vs_Delt.Pf4-infection_downregulated
      WBPaper00065096:npr-8(ok1439)_downregulated_Day10_25C
      WBPaper00065315:mating_downregulated_Day2-7
      WBPaper00065749:endu-2(tm4977)_upregulated
      WBPaper00065749:Heat-Shock_downregulated_endu-2(tm4977)
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      WBPaper00066204:CdCl2_upregulated_mRNA
      cgc4489_group_5
      WBPaper00026952:class_B
      WBPaper00028948:cep-1(gk138)_upregulated
      WBPaper00029437:dcr-1_upregulated
      WBPaper00030985:Enterococcus_faecalis_downregulated
      WBPaper00030985:Erwinia_carotovora_downregulated
      WBPaper00030985:Serratia_marcesens_downregulated
      WBPaper00031003:24hr_muscle_enriched
      WBPaper00031003:total_muscle_enriched
      WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2up
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00045015:nhr-25(RNAi)_upregulated
      WBPaper00045673:colistin_upregulated
      WBPaper00053550:daf-19(m86)_upregulated_L1
    Interaction: WBInteraction000284160
      WBInteraction000322955
      WBInteraction000358328
      WBInteraction000472802
      WBInteraction000473343
      WBInteraction000475450
  Map_info: Map: V Position: -3.68778 Error: 0.001443
    Positive: Positive_clone: C02E7 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00031996
    WBPaper00038491
    WBPaper00055090
    WBPaper00058310
    WBPaper00059550
    WBPaper00063926
    WBPaper00064636
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene