WormBase Tree Display for Gene: WBGene00015338
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| WBGene00015338 | SMap | S_parent | Sequence | C02E7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | catp-2 | Person_evidence | WBPerson61 | |||||
| Sequence_name | C02E7.1 | ||||||||
| Molecular_name | C02E7.1a | ||||||||
| C02E7.1a.1 | |||||||||
| CE07838 | |||||||||
| C02E7.1b | |||||||||
| CE51374 | |||||||||
| C02E7.1b.1 | |||||||||
| Other_name | CELE_C02E7.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | catp-2 | ||||||||
| DB_info | Database | AceView | gene | 5F415 | |||||
| WormQTL | gene | WBGene00015338 | |||||||
| WormFlux | gene | WBGene00015338 | |||||||
| NDB | locus_tag | CELE_C02E7.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015338|UniProtKB=O16436 | |||||||
| family | PTHR43294 | ||||||||
| NCBI | gene | 182114 | |||||||
| RefSeq | protein | NM_001322555.1 | |||||||
| NM_071927.2 | |||||||||
| TrEMBL | UniProtAcc | O16436 | |||||||
| A0A131MBN3 | |||||||||
| UniProt_GCRP | UniProtAcc | O16436 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 21 Oct 2008 09:57:23 | WBPerson2970 | Name_change | CGC_name | catp-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | catp | ||||||||
| Allele (77) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (17) | |||||||||
| Ortholog (32) | |||||||||
| Paralog (14) | |||||||||
| Structured_description | Automated_description | Predicted to enable P-type sodium:potassium-exchanging transporter activity. Predicted to be involved in intracellular monoatomic cation homeostasis and monoatomic cation transmembrane transport. Predicted to be located in plasma membrane. Is an ortholog of human ATP12A (ATPase H+/K+ transporting non-gastric alpha2 subunit) and ATP4A (ATPase H+/K+ transporting subunit alpha). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:10534 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:819) | ||||
| Molecular_info | Corresponding_CDS | C02E7.1a | |||||||
| C02E7.1b | |||||||||
| Corresponding_transcript | C02E7.1a.1 | ||||||||
| C02E7.1b.1 | |||||||||
| Other_sequence | JI462532.1 | ||||||||
| JO470954.1 | |||||||||
| BXC07339_1 | |||||||||
| Associated_feature | WBsf661242 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00039417 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00009990 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012571 | ||||||||
| Expr1143533 | |||||||||
| Expr2027969 | |||||||||
| Drives_construct | WBCnstr00028921 | ||||||||
| Construct_product | WBCnstr00028921 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (98) | |||||||||
| Interaction | WBInteraction000284160 | ||||||||
| WBInteraction000322955 | |||||||||
| WBInteraction000358328 | |||||||||
| WBInteraction000472802 | |||||||||
| WBInteraction000473343 | |||||||||
| WBInteraction000475450 | |||||||||
| Map_info | Map | V | Position | -3.68778 | Error | 0.001443 | |||
| Positive | Positive_clone | C02E7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031996 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00058310 | |||||||||
| WBPaper00059550 | |||||||||
| WBPaper00063926 | |||||||||
| WBPaper00064636 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
