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WormBase Tree Display for Gene: WBGene00015232

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Name Class

WBGene00015232SMapS_parentSequenceB0511
IdentityVersion1
NameSequence_nameB0511.6
Molecular_nameB0511.6
B0511.6.1
CE26853
Other_nameCELE_B0511.6Accession_evidenceNDBBX284601
Public_nameB0511.6
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:55WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (27)
StrainWBStrain00037234
RNASeq_FPKM (74)
GO_annotation (14)
Contained_in_operonCEOP1628
OrthologWBGene00059909Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00033411Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00152357Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00121042Caenorhabditis japonicaFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00117385Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WBGene00161315Caenorhabditis brenneriFrom_analysisOMA
TreeFam
WormBase-Compara
WBGene00222099Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g9784Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g5052Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g17042Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g7384Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g3000Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g22681Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g5384Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g2910Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g23960Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g15137Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00507.g11667Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-B0511.6Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold501.g2319Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00260.g8170Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_05178Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_002427Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g05686Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g12137Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10212700Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrI_pilon.g2092Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00237334Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00304298Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00263060Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00285242Trichuris murisFrom_analysisWormBase-Compara
SGD:S000004903Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
FB:FBgn0266581Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-030131-9685Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:2741Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:1914192Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:1549712Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
Paralog (37)
Structured_descriptionConcise_descriptionB0511.6 encodes a DEAD-box helicase; loss of B0511.6 activity via RNAi indicates that B0511.6 activity is required for larval development.Paper_evidenceWBPaper00006395
WBPaper00025054
WBPaper00031057
Curator_confirmedWBPerson1843
Date_last_updated09 Oct 2007 00:00:00
Automated_descriptionPredicted to enable several functions, including ATP binding activity; ATP hydrolysis activity; and RNA helicase activity. Predicted to be involved in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Predicted to be located in nucleolus. Expressed in head and tail. Is an ortholog of human DDX18 (DEAD-box helicase 18).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSB0511.6
Corresponding_transcriptB0511.6.1
Other_sequence (92)
Associated_featureWBsf034264
WBsf656891
WBsf218468
WBsf218469
WBsf218470
Experimental_infoRNAi_result (13)
Expr_patternChronogram2048
Expr5081
Expr1019860
Expr1036523
Expr1143304
Expr2000230
Expr2018450
Drives_constructWBCnstr00002099
WBCnstr00028985
Construct_productWBCnstr00028985
Microarray_results (25)
Expression_cluster (128)
InteractionWBInteraction000030201
WBInteraction000035400
WBInteraction000035533
WBInteraction000036852
WBInteraction000036854
WBInteraction000036855
WBInteraction000037072
WBInteraction000037281
WBInteraction000037741
WBInteraction000038059
WBInteraction000038674
WBInteraction000038771
WBInteraction000038798
WBInteraction000039732
WBInteraction000040207
WBInteraction000040318
WBInteraction000040396
WBInteraction000040659
WBInteraction000041797
WBInteraction000042669
WBInteraction000044129
WBInteraction000045197
WBInteraction000046763
WBInteraction000047753
WBInteraction000047995
WBInteraction000047997
WBInteraction000048000
WBInteraction000048003
WBInteraction000048007
WBInteraction000048010
WBInteraction000048014
WBInteraction000048017
WBInteraction000048035
WBInteraction000049026
WBInteraction000050057
WBInteraction000050212
WBInteraction000104447
WBInteraction000105513
WBInteraction000105546
WBInteraction000106154
WBInteraction000106180
WBInteraction000106494
WBInteraction000108875
WBInteraction000109428
WBInteraction000110251
WBInteraction000110597
WBInteraction000111147
WBInteraction000111882
WBInteraction000114572
WBInteraction000114994
WBInteraction000115283
WBInteraction000115542
WBInteraction000117727
WBInteraction000117901
WBInteraction000119345
WBInteraction000119808
WBInteraction000120851
WBInteraction000120974
WBInteraction000121894
WBInteraction000124238
WBInteraction000124839
WBInteraction000125109
WBInteraction000125717
WBInteraction000125745
WBInteraction000125794
WBInteraction000125907
WBInteraction000126819
WBInteraction000133228
WBInteraction000133788
WBInteraction000133838
WBInteraction000134698
WBInteraction000134750
WBInteraction000134783
WBInteraction000135347
WBInteraction000137228
WBInteraction000141988
WBInteraction000142355
WBInteraction000143473
WBInteraction000145255
WBInteraction000145828
WBInteraction000146196
WBInteraction000147815
WBInteraction000148605
WBInteraction000149947
WBInteraction000150316
WBInteraction000152599
WBInteraction000156626
WBInteraction000157140
WBInteraction000161625
WBInteraction000163757
WBInteraction000167887
WBInteraction000168989
WBInteraction000170139
WBInteraction000170153
WBInteraction000171584
WBInteraction000171685
WBInteraction000172567
WBInteraction000176986
WBInteraction000177013
WBInteraction000180779
WBInteraction000183148
WBInteraction000185495
WBInteraction000186475
WBInteraction000186513
WBInteraction000188052
WBInteraction000188192
WBInteraction000188662
WBInteraction000189710
WBInteraction000190341
WBInteraction000191230
WBInteraction000192728
WBInteraction000195194
WBInteraction000195338
WBInteraction000197155
WBInteraction000199405
WBInteraction000199732
WBInteraction000201564
WBInteraction000202457
WBInteraction000203631
WBInteraction000206288
WBInteraction000208253
WBInteraction000209211
WBInteraction000210421
WBInteraction000212310
WBInteraction000213090
WBInteraction000215536
WBInteraction000215919
WBInteraction000217515
WBInteraction000217653
WBInteraction000217814
WBInteraction000218462
WBInteraction000219571
WBInteraction000219695
WBInteraction000221703
WBInteraction000222263
WBInteraction000222919
WBInteraction000223426
WBInteraction000223912
WBInteraction000226628
WBInteraction000229384
WBInteraction000230452
WBInteraction000230492
WBInteraction000233271
WBInteraction000233743
WBInteraction000236767
WBInteraction000243199
WBInteraction000243976
WBInteraction000243977
WBInteraction000245508
WBInteraction000246336
WBInteraction000247284
WBInteraction000248511
WBInteraction000249514
WBInteraction000249865
WBInteraction000250309
WBInteraction000254084
WBInteraction000260567
WBInteraction000262778
WBInteraction000267310
WBInteraction000269287
WBInteraction000275408
WBInteraction000275409
WBInteraction000275555
WBInteraction000277272
WBInteraction000279286
WBInteraction000279477
WBInteraction000281491
WBInteraction000285582
WBInteraction000286744
WBInteraction000289314
WBInteraction000293981
WBInteraction000295415
WBInteraction000301299
WBInteraction000303093
WBInteraction000303189
WBInteraction000304750
WBInteraction000307851
WBInteraction000310033
WBInteraction000310946
WBInteraction000311927
WBInteraction000312121
WBInteraction000312236
WBInteraction000315192
WBInteraction000317321
WBInteraction000317956
WBInteraction000318684
WBInteraction000326783
WBInteraction000328648
WBInteraction000332455
WBInteraction000333591
WBInteraction000334313
WBInteraction000341149
WBInteraction000349598
WBInteraction000351230
WBInteraction000351858
WBInteraction000360394
WBInteraction000367503
WBInteraction000368389
WBInteraction000368941
WBInteraction000371876
WBInteraction000373276
WBInteraction000375297
WBInteraction000375684
WBInteraction000376635
WBInteraction000379921
WBInteraction000382296
WBInteraction000384862
WBInteraction000385005
WBInteraction000386170
WBInteraction000386567
WBInteraction000386752
WBInteraction000394414
WBInteraction000398994
WBInteraction000399628
WBInteraction000402171
WBInteraction000404151
WBInteraction000404874
WBInteraction000406966
WBInteraction000413722
WBInteraction000413806
WBInteraction000419817
WBInteraction000425584
WBInteraction000427087
WBInteraction000427439
WBInteraction000427865
WBInteraction000430803
WBInteraction000431580
WBInteraction000434627
WBInteraction000434870
WBInteraction000436113
WBInteraction000439511
WBInteraction000440748
WBInteraction000451353
WBInteraction000451386
WBInteraction000456120
WBInteraction000457000
WBInteraction000457766
WBInteraction000457788
WBInteraction000460400
WBInteraction000462451
WBInteraction000462587
WBInteraction000462850
WBInteraction000463812
WBInteraction000464139
WBInteraction000464561
WBInteraction000465080
WBInteraction000465445
WBInteraction000465620
WBInteraction000465755
WBInteraction000466387
WBInteraction000466572
WBInteraction000466573
WBInteraction000466901
WBInteraction000466914
WBInteraction000467672
WBInteraction000467756
WBInteraction000467890
WBInteraction000467944
WBInteraction000468027
WBInteraction000468788
WBInteraction000468872
WBInteraction000469067
WBInteraction000469367
WBInteraction000469580
WBInteraction000470068
WBInteraction000470134
WBInteraction000470462
WBInteraction000470758
WBInteraction000471465
WBInteraction000472631
WBInteraction000472812
WBInteraction000472813
WBInteraction000472949
WBInteraction000472977
WBInteraction000473336
WBInteraction000474345
WBInteraction000474699
WBInteraction000475334
WBInteraction000552389
WBInteraction000552604
WBInteraction000553480
WBInteraction000553544
WBInteraction000553730
WBInteraction000568205
WBInteraction000570249
WBInteraction000582168
WBInteraction000583360
WBInteraction000586127
Map_infoPositivePositive_cloneB0511Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionI5.05891
ReferenceWBPaper00029254
WBPaper00038491
WBPaper00042178
WBPaper00055090
WBPaper00064339
WBPaper00064934
MethodGene