WormBase Tree Display for Gene: WBGene00015232

WBGene00015232 SMap: S_parent: Sequence: B0511
  Identity: Version: 1
    Name: Sequence_name: B0511.6
      Molecular_name: B0511.6
        B0511.6.1
        CE26853
      Other_name: CELE_B0511.6 Accession_evidence: NDB BX284601
      Public_name: B0511.6
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:55 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (27)
    Strain: WBStrain00037234
    RNASeq_FPKM (74)
    GO_annotation (14)
    Contained_in_operon: CEOP1628
    Ortholog: WBGene00059909 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00033411 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00152357 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00121042 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00117385 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
      WBGene00161315 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00222099 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g9784 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g5052 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g17042 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g7384 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g3000 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g22681 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g5384 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g2910 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g23960 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g15137 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00507.g11667 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-B0511.6 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold501.g2319 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00260.g8170 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_05178 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_002427 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g05686 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g12137 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10212700 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g2092 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00237334 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00304298 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00263060 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00285242 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000004903 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0266581 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-030131-9685 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:2741 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1914192 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1549712 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog (37)
    Structured_description: Concise_description: B0511.6 encodes a DEAD-box helicase; loss of B0511.6 activity via RNAi indicates that B0511.6 activity is required for larval development. Paper_evidence: WBPaper00006395
            WBPaper00025054
            WBPaper00031057
          Curator_confirmed: WBPerson1843
          Date_last_updated: 09 Oct 2007 00:00:00
      Automated_description: Predicted to enable several functions, including ATP binding activity; ATP hydrolysis activity; and RNA helicase activity. Predicted to be involved in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Predicted to be located in nucleolus. Expressed in head and tail. Is an ortholog of human DDX18 (DEAD-box helicase 18). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: B0511.6
    Corresponding_transcript: B0511.6.1
    Other_sequence (92)
    Associated_feature: WBsf034264
      WBsf656891
      WBsf218468
      WBsf218469
      WBsf218470
  Experimental_info: RNAi_result (13)
    Expr_pattern: Chronogram2048
      Expr5081
      Expr1019860
      Expr1036523
      Expr1143304
      Expr2000230
      Expr2018450
    Drives_construct: WBCnstr00002099
      WBCnstr00028985
    Construct_product: WBCnstr00028985
    Microarray_results (25)
    Expression_cluster (128)
    Interaction (288)
  Map_info: Positive: Positive_clone: B0511 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I 5.05891
  Reference: WBPaper00029254
    WBPaper00038491
    WBPaper00042178
    WBPaper00055090
    WBPaper00064339
    WBPaper00064934
  Method: Gene