WormBase Tree Display for Gene: WBGene00015153
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| WBGene00015153 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | idpp-2 | Person_evidence | WBPerson1820 | |||||
| Sequence_name | B0348.5 | ||||||||
| Molecular_name | B0348.5a | ||||||||
| B0348.5a.1 | |||||||||
| CE50544 | |||||||||
| B0348.5b | |||||||||
| CE50658 | |||||||||
| B0348.5b.1 | |||||||||
| Other_name | Y108G3B.a | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_B0348.5 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | idpp-2 | ||||||||
| DB_info | Database | AceView | gene | 5A485 | |||||
| WormQTL | gene | WBGene00015153 | |||||||
| WormFlux | gene | WBGene00015153 | |||||||
| NDB | locus_tag | CELE_B0348.5 | |||||||
| NCBI | gene | 181937 | |||||||
| RefSeq | protein | NM_001380574.2 | |||||||
| NM_001313107.4 | |||||||||
| TrEMBL | UniProtAcc | A0A0K3AUN6 | |||||||
| A0A0K3AV61 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A0K3AV61 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 09 Mar 2015 14:30:37 | WBPerson4025 | Event | Acquires_merge | WBGene00077683 | ||||
| 3 | 04 Jan 2022 10:41:13 | WBPerson1983 | Name_change | CGC_name | idpp-2 | ||||
| Acquires_merge | WBGene00077683 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | idpp | ||||||||
| Allele (96) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (21) | |||||||||
| Structured_description | Automated_description | Enriched in DVA; intestine; pharyngeal-intestinal valve; and pm6 based on single-cell RNA-seq and microarray studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on tiling array; microarray; and RNA-seq studies. Is affected by seven chemicals including multi-walled carbon nanotube; Sirolimus; and antimycin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | B0348.5a | |||||||
| B0348.5b | |||||||||
| Corresponding_CDS_history | B0348.5:wp247 | ||||||||
| Corresponding_transcript | B0348.5a.1 | ||||||||
| B0348.5b.1 | |||||||||
| Associated_feature | WBsf660999 | ||||||||
| WBsf661081 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00036537 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00024386 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00027143 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00061971 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00024385 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00038960 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00009720 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022073 | ||||||||
| Expr1023605 | |||||||||
| Expr1036484 | |||||||||
| Expr1143136 | |||||||||
| Expr1163306 | |||||||||
| Expr2000154 | |||||||||
| Expr2018372 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (127) | |||||||||
| Interaction | WBInteraction000302513 | ||||||||
| WBInteraction000400148 | |||||||||
| WBInteraction000445449 | |||||||||
| Map_info | Positive | Positive_clone | B0348 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -20.0706 | |||||||
| Reference | WBPaper00064648 | ||||||||
| Method | Gene |
