WormBase Tree Display for Gene: WBGene00015083
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| WBGene00015083 | SMap | S_parent | Sequence | B0244 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | egg-1 | Person_evidence | WBPerson597 | |||||
| Sequence_name | B0244.8 | ||||||||
| Molecular_name | B0244.8 | ||||||||
| B0244.8.1 | |||||||||
| CE32094 | |||||||||
| Other_name | CELE_B0244.8 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | egg-1 | ||||||||
| DB_info | Database | AceView | gene | 3G819 | |||||
| WormQTL | gene | WBGene00015083 | |||||||
| WormFlux | gene | WBGene00015083 | |||||||
| NDB | locus_tag | CELE_B0244.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015083|UniProtKB=Q09967 | |||||||
| family | PTHR24270 | ||||||||
| NCBI | gene | 175804 | |||||||
| RefSeq | protein | NM_065836.11 | |||||||
| SwissProt | UniProtAcc | Q09967 | |||||||
| TREEFAM | TREEFAM_ID | TF351699 | |||||||
| UniProt_GCRP | UniProtAcc | Q09967 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 06 May 2005 10:44:15 | WBPerson2970 | Name_change | CGC_name | egg-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | egg | ||||||||
| Allele (25) | |||||||||
| Strain | WBStrain00036204 | ||||||||
| WBStrain00000049 | |||||||||
| WBStrain00005631 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00019811 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00003071 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00003072 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00003738 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00004374 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00008609 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00008779 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00019756 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00020481 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | egg-1 encodes a LDL-receptor repeat-containing protein that is required for fertilization; egg-1 acts redundantly with a similar protein, egg-2, and both proteins are expressed in the developing oocyte; egg-1 is not required for male fertility; egg-1 localizes to the oocyte plasma membrane; the structure and localization of the egg-1 protein suggest that it is required together with egg-2, for gamete interaction during fertilization. | Paper_evidence | WBPaper00026987 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 16 Nov 2010 00:00:00 | ||||||||
| Automated_description | Predicted to enable signaling receptor activity. Involved in positive regulation of protein localization to cell periphery and sexual reproduction. Located in plasma membrane. Expressed in germ line. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | B0244.8 | |||||||
| Corresponding_CDS_history | B0244.8:wp87 | ||||||||
| Corresponding_transcript | B0244.8.1 | ||||||||
| Other_sequence (14) | |||||||||
| Associated_feature | WBsf992507 | ||||||||
| WBsf992508 | |||||||||
| WBsf224991 | |||||||||
| Experimental_info | RNAi_result (11) | ||||||||
| Expr_pattern | Expr3802 | ||||||||
| Expr1024782 | |||||||||
| Expr1036443 | |||||||||
| Expr1143003 | |||||||||
| Expr2011199 | |||||||||
| Expr2029435 | |||||||||
| Drives_construct | WBCnstr00004911 | ||||||||
| WBCnstr00029100 | |||||||||
| Construct_product | WBCnstr00029100 | ||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (214) | |||||||||
| Interaction (293) | |||||||||
| Map_info | Map | III | Position | -1.44666 | Error | 0.000121 | |||
| Positive | Positive_clone | B0244 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5160 | |||||||
| 4431 | |||||||||
| 4788 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00010769 | ||||||||
| WBPaper00023987 | |||||||||
| WBPaper00026987 | |||||||||
| WBPaper00036882 | |||||||||
| WBPaper00037611 | |||||||||
| WBPaper00037715 | |||||||||
| WBPaper00044847 | |||||||||
| WBPaper00052155 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
