WormBase Tree Display for Gene: WBGene00015052

WBGene00015052 SMap: S_parent: Sequence: B0218
  Identity: Version: 2
    Name: CGC_name: clec-52 Person_evidence: WBPerson655
      Sequence_name: B0218.8
      Molecular_name (3)
      Other_name: CELE_B0218.8 Accession_evidence: NDB BX284604
      Public_name: clec-52
    DB_info: Database: AceView gene 4I932
        WormQTL gene WBGene00015052
        WormFlux gene WBGene00015052
        NDB locus_tag CELE_B0218.8
        Panther gene CAEEL|WormBase=WBGene00015052|UniProtKB=Q17452
          family PTHR22803
        NCBI gene 181855
        RefSeq protein NM_068970.7
        TrEMBL UniProtAcc Q17452
        UniProt_GCRP UniProtAcc Q17452
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:55 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 29 Apr 2005 13:53:46 WBPerson2970 Name_change: CGC_name: clec-52
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: clec
    Allele (26)
    Strain: WBStrain00033921
      WBStrain00001296
    RNASeq_FPKM (74)
    GO_annotation: 00058204
      00058205
    Ortholog: WBGene00125665 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00102707 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00094324 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00099573 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00094763 Pristionchus pacificus From_analysis: Inparanoid_8
      CBOVI.g8044 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP31.g8038 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP38.g14219 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      Cang_2012_03_13_00159.g5885 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_00159.g5886 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_00159.g5887 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_00338.g9437 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_00992.g15267 Caenorhabditis angaria From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g13739 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g22714 Panagrellus redivivus From_analysis: WormBase-Compara
      chrIV_pilon.g11009 Caenorhabditis elegans From_analysis: WormBase-Compara
      ZFIN:ZDB-GENE-050309-166 Danio rerio From_analysis: OrthoInspector
            Panther
      ZFIN:ZDB-GENE-041014-88 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
      ZFIN:ZDB-GENE-041014-91 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
      ZFIN:ZDB-GENE-060503-423 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
      ZFIN:ZDB-GENE-041210-284 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
      ZFIN:ZDB-GENE-041210-290 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
      ZFIN:ZDB-GENE-060503-541 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
      ZFIN:ZDB-GENE-060503-354 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
      ZFIN:ZDB-GENE-070705-505 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
      ZFIN:ZDB-GENE-160113-18 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
      ZFIN:ZDB-GENE-041014-89 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
      ZFIN:ZDB-GENE-030131-7910 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
      ZFIN:ZDB-GENE-060503-730 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
      ZFIN:ZDB-GENE-060503-353 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
      ZFIN:ZDB-GENE-070424-18 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
      ZFIN:ZDB-GENE-070705-503 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
      ZFIN:ZDB-GENE-070705-506 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
      ZFIN:ZDB-GENE-070705-493 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
      ZFIN:ZDB-GENE-060503-72 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
      ZFIN:ZDB-GENE-060503-28 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
      ZFIN:ZDB-GENE-160113-20 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
      ZFIN:ZDB-GENE-090915-5 Danio rerio From_analysis: OrthoInspector
            Panther
      ZFIN:ZDB-GENE-131121-572 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
      ZFIN:ZDB-GENE-041210-288 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
      ZFIN:ZDB-GENE-060503-636 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
      ZFIN:ZDB-GENE-070705-165 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
      ZFIN:ZDB-GENE-120323-1 Danio rerio From_analysis: OrthoInspector
            Panther
      HGNC:6729 Homo sapiens From_analysis: OrthoInspector
            Panther
      HGNC:8601 Homo sapiens From_analysis: Panther
            SonicParanoid
      HGNC:16875 Homo sapiens From_analysis: OrthoInspector
            Panther
      HGNC:9042 Homo sapiens From_analysis: OrthoInspector
            Panther
      HGNC:38828 Homo sapiens From_analysis: OrthoInspector
            Panther
      MGI:106662 Mus musculus From_analysis: OrthoInspector
            Panther
      MGI:102468 Mus musculus From_analysis: OrthoInspector
            Panther
      MGI:1913455 Mus musculus From_analysis: Panther
            PhylomeDB
      RGD:3256 Rattus norvegicus From_analysis: Panther
            SonicParanoid
      RGD:1309777 Rattus norvegicus From_analysis: OrthoInspector
            Panther
      RGD:1303341 Rattus norvegicus From_analysis: Panther
            SonicParanoid
    Paralog (12)
    Structured_description: Automated_description: Predicted to enable signaling receptor activity. Involved in defense response to Gram-positive bacterium. Human ortholog(s) of this gene implicated in hepatocellular carcinoma and liver cirrhosis. Is an ortholog of several human genes including LY75 (lymphocyte antigen 75); MRC2 (mannose receptor C type 2); and REG3A (regenerating family member 3 alpha). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:5082 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:8601)
      DOID:684 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:8601)
  Molecular_info: Corresponding_CDS: B0218.8
    Corresponding_transcript: B0218.8.1
    Other_sequence: PT03782
      PTC03364_1
    Associated_feature: WBsf716782
      WBsf230393
  Experimental_info: RNAi_result: WBRNAi00075898 Inferred_automatically: RNAi_primary
      WBRNAi00009595 Inferred_automatically: RNAi_primary
      WBRNAi00088967 Inferred_automatically: RNAi_primary
      WBRNAi00082463 Inferred_automatically: RNAi_primary
      WBRNAi00038750 Inferred_automatically: RNAi_primary
      WBRNAi00090635 Inferred_automatically: RNAi_primary
      WBRNAi00028003 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram168
      Chronogram2060
      Expr3788
      Expr5021
      Expr1013493
      Expr1142960
      Expr2010185
      Expr2028427
    Drives_construct: WBCnstr00001072
      WBCnstr00002188
      WBCnstr00002189
      WBCnstr00011659
      WBCnstr00029125
    Construct_product: WBCnstr00029125
    Microarray_results (16)
    Expression_cluster (352)
    Interaction (32)
  Map_info: Map: IV Position: 3.64812 Error: 0.000615
    Positive: Positive_clone: B0218 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00026980
    WBPaper00032331
    WBPaper00038491
    WBPaper00055090
    WBPaper00059843
    WBPaper00064375
    WBPaper00064552
    WBPaper00065877
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene