WormBase Tree Display for Gene: WBGene00015007
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| WBGene00015007 | SMap | S_parent | Sequence | B0041 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ain-2 | Paper_evidence | WBPaper00031252 | |||||
| Person_evidence | WBPerson237 | ||||||||
| Sequence_name | B0041.2 | ||||||||
| Molecular_name (22) | |||||||||
| Other_name | CELE_B0041.2 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | ain-2 | ||||||||
| DB_info | Database | AceView | gene | 1F227 | |||||
| WormQTL | gene | WBGene00015007 | |||||||
| WormFlux | gene | WBGene00015007 | |||||||
| NDB | locus_tag | CELE_B0041.2 | |||||||
| NCBI | gene | 172076 | |||||||
| RefSeq | protein | NM_001379884.1 | |||||||
| NM_001356820.2 | |||||||||
| NM_001392189.1 | |||||||||
| NM_001356823.4 | |||||||||
| NM_001356822.4 | |||||||||
| NM_001379889.3 | |||||||||
| NM_001025786.5 | |||||||||
| TREEFAM | TREEFAM_ID | TF350152 | |||||||
| TrEMBL | UniProtAcc | A0A2C9C2E8 | |||||||
| A0A2C9C358 | |||||||||
| H2KY59 | |||||||||
| Q95R18 | |||||||||
| H2KY58 | |||||||||
| H2KY60 | |||||||||
| A0A2C9C2L0 | |||||||||
| UniProt_GCRP | UniProtAcc | H2KY58 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 02 Apr 2009 15:36:55 | WBPerson9133 | Name_change | CGC_name | ain-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ain | ||||||||
| Allele (108) | |||||||||
| Strain | WBStrain00026535 | ||||||||
| WBStrain00054872 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00021370 | ||||||||
| 00021371 | |||||||||
| 00021372 | |||||||||
| 00021373 | |||||||||
| Ortholog (23) | |||||||||
| Structured_description | Concise_description | ain-2 encodes, by alternative splicing, three isoforms of anunfamiliar protein paralogous to AIN-1, and homologous to Brugia malayi14748.m00068, 14052.m00191, and 14963.m01790; AIN-2 protein bindsGEI-4 and GEI-16 in yeast two-hybrid experiments; AIN-2 and itsnematode homologs have weak similarity to human TNRC6A (GW182;OMIM:610739) and Drosophila GAWKY; ain-2 has no obvious function inmass RNAi assays. | Paper_evidence | WBPaper00006332 | |||||
| WBPaper00026707 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 15 Jul 2009 00:00:00 | ||||||||
| Automated_description | Involved in negative regulation of gene expression; regulation of cell fate specification; and regulation of development, heterochronic. Expressed widely. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | B0041.2a | |||||||
| B0041.2b | |||||||||
| B0041.2c | |||||||||
| B0041.2d | |||||||||
| B0041.2e | |||||||||
| B0041.2f | |||||||||
| B0041.2g | |||||||||
| Corresponding_CDS_history | B0041.2b:wp93 | ||||||||
| B0041.2b:wp261 | |||||||||
| B0041.2c:wp224 | |||||||||
| Corresponding_transcript | B0041.2a.1 | ||||||||
| B0041.2a.2 | |||||||||
| B0041.2b.1 | |||||||||
| B0041.2c.1 | |||||||||
| B0041.2d.1 | |||||||||
| B0041.2e.1 | |||||||||
| B0041.2f.1 | |||||||||
| B0041.2g.1 | |||||||||
| Other_sequence | CRC03536_1 | ||||||||
| CRC04330_1 | |||||||||
| CBC12396_1 | |||||||||
| CR10521 | |||||||||
| CR12291 | |||||||||
| Associated_feature | WBsf656239 | ||||||||
| WBsf656240 | |||||||||
| WBsf656241 | |||||||||
| WBsf983457 | |||||||||
| WBsf983458 | |||||||||
| WBsf1009690 | |||||||||
| WBsf1009691 | |||||||||
| WBsf217558 | |||||||||
| WBsf217559 | |||||||||
| WBsf217560 | |||||||||
| Experimental_info (9) | |||||||||
| Map_info | Map | I | Position | -1.02852 | Error | 0.002242 | |||
| Positive | Positive_clone | B0041 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (19) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
