WormBase Tree Display for Gene: WBGene00014938

WBGene00014938 SMap: S_parent: Sequence: Y62E10A
  Identity: Version: 4
    Name: CGC_name: mdt-9 Paper_evidence: WBPaper00035311
      Sequence_name: Y62E10A.11
      Molecular_name: Y62E10A.11
        Y62E10A.11.1
        CE40375
        Y62E10A.11.2
      Other_name: CELE_Y62E10A.11 Accession_evidence: NDB BX284604
      Public_name: mdt-9
    DB_info: Database: AceView gene 4O151
        WormQTL gene WBGene00014938
        WormFlux gene WBGene00014938
        NDB locus_tag CELE_Y62E10A.11
        Panther gene CAEEL|Gene_ORFName=Y62E10A.11|UniProtKB=Q9U1X4
          family PTHR13276
        NCBI gene 36805063
        RefSeq protein NM_001268808.4
        TrEMBL UniProtAcc Q0KHC0
    Species: Caenorhabditis elegans
    History: Version_change: 1 27 May 2004 15:23:24 WBPerson1971 Event: Imported: Initial conversion from Pseudogene class of WS125
        2 10 Jul 2006 12:22:02 WBPerson4025 Event: Changed_class: Pseudogene CDS
        3 23 Apr 2010 11:09:25 WBPerson2970 Name_change: CGC_name: mdt-9
        4 06 Mar 2018 14:44:02 WBPerson4025 Event: Split_into: WBGene00302964
      Split_into: WBGene00302964
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mdt
    Allele (29)
    Strain: WBStrain00051409
    RNASeq_FPKM (74)
    GO_annotation: 00055823
      00055824
      00120997
      00120998
    Contained_in_operon: CEOP4548
      CEOP5589
    Ortholog (32)
    Paralog: WBGene00014174 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable guanyl-nucleotide exchange factor activity. Predicted to be involved in protein transport and small GTPase mediated signal transduction. Is an ortholog of human RABIF (RAB interacting factor). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y62E10A.11
    Corresponding_CDS_history: Y62E10A.11a:wp107
      Y62E10A.11a:wp264
      Y62E10A.11b:wp107
      Y62E10A.11b:wp264
    Corresponding_transcript: Y62E10A.11.1
      Y62E10A.11.2
    Corresponding_pseudogene_history: Y62E10A.11:wp160
    Other_sequence: PPC13430_1
      CBC02816_1
      PPC10812_1
      CJC05125_1
    Associated_feature: WBsf646522
      WBsf998397
      WBsf015146
      WBsf229430
  Experimental_info: RNAi_result: WBRNAi00001527 Inferred_automatically: RNAi_primary
      WBRNAi00026887 Inferred_automatically: RNAi_primary
      WBRNAi00027543 Inferred_automatically: RNAi_primary
      WBRNAi00057842 Inferred_automatically: RNAi_primary
      WBRNAi00117731 Inferred_automatically: RNAi_primary
      WBRNAi00021219 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1022805
      Expr1036408
      Expr1161276
      Expr2013487
      Expr2031721
    Drives_construct: WBCnstr00029174
    Construct_product: WBCnstr00029174
    Microarray_results (32)
    Expression_cluster (105)
    Interaction: WBInteraction000561241
      WBInteraction000564918
      WBInteraction000569780
      WBInteraction000580883
  Map_info: Map: IV Position: 8.86798
    Positive: Positive_clone: Y62E10A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00065308
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene