WormBase Tree Display for Gene: WBGene00014218
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| WBGene00014218 | SMap | S_parent | Sequence | ZK1098 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | prp-40 | Person_evidence | WBPerson11752 | |||||
| Sequence_name | ZK1098.1 | ||||||||
| Molecular_name | ZK1098.1a | ||||||||
| ZK1098.1a.1 | |||||||||
| CE03847 | |||||||||
| ZK1098.1b | |||||||||
| CE46142 | |||||||||
| ZK1098.1c | |||||||||
| CE00362 | |||||||||
| ZK1098.1b.1 | |||||||||
| ZK1098.1c.1 | |||||||||
| Other_name | CELE_ZK1098.1 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | prp-40 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 11 Mar 2021 09:37:10 | WBPerson1983 | Name_change | CGC_name | prp-40 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | prp | ||||||||
| Allele (36) | |||||||||
| Possibly_affected_by | WBVar02157269 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00043377 | ||||||||
| 00043378 | |||||||||
| 00043379 | |||||||||
| 00043380 | |||||||||
| 00043381 | |||||||||
| 00043382 | |||||||||
| 00043383 | |||||||||
| 00120933 | |||||||||
| Contained_in_operon | CEOP3596 | ||||||||
| Ortholog (48) | |||||||||
| Structured_description | Concise_description | ZK1098.1 encodes a protein, with multiple WW/rsp5/WWP domains and FF domains, required for embryonic viability and for normally high rates of postembryonic growth. | Paper_evidence | WBPaper00005654 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable RNA binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Located in nucleus. Expressed in several structures, including body wall musculature; gonad; and nervous system. Is an ortholog of human PRPF40A (pre-mRNA processing factor 40 homolog A). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK1098.1a | |||||||
| ZK1098.1b | |||||||||
| ZK1098.1c | |||||||||
| Corresponding_transcript | ZK1098.1a.1 | ||||||||
| ZK1098.1b.1 | |||||||||
| ZK1098.1c.1 | |||||||||
| Other_sequence (55) | |||||||||
| Associated_feature | WBsf645494 | ||||||||
| WBsf659413 | |||||||||
| WBsf659414 | |||||||||
| WBsf659415 | |||||||||
| WBsf993716 | |||||||||
| WBsf993717 | |||||||||
| WBsf993718 | |||||||||
| WBsf1015626 | |||||||||
| WBsf225586 | |||||||||
| Experimental_info | RNAi_result (21) | ||||||||
| Expr_pattern | Expr9513 | ||||||||
| Expr15830 | |||||||||
| Expr1012317 | |||||||||
| Expr1036371 | |||||||||
| Expr1162531 | |||||||||
| Expr2008705 | |||||||||
| Expr2026939 | |||||||||
| Drives_construct | WBCnstr00029218 | ||||||||
| Construct_product | WBCnstr00014078 | ||||||||
| WBCnstr00029218 | |||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (102) | |||||||||
| Interaction (111) | |||||||||
| Map_info | Positive | Positive_clone | ZK1098 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | 0.577519 | |||||||
| Reference | WBPaper00035598 | ||||||||
| WBPaper00038444 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061804 | |||||||||
| WBPaper00063335 | |||||||||
| WBPaper00065227 | |||||||||
| Method | Gene |
