WormBase Tree Display for Gene: WBGene00013980
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WBGene00013980 | SMap | S_parent | Sequence | ZK507 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | dos-1 | Person_evidence | WBPerson242 | |||||
Sequence_name | ZK507.4 | ||||||||
Molecular_name | ZK507.4 | ||||||||
ZK507.4.1 | |||||||||
CE38765 | |||||||||
Other_name | CELE_ZK507.4 | Accession_evidence | NDB | BX284603 | |||||
Public_name | dos-1 | ||||||||
DB_info | Database | AceView | gene | 3K191 | |||||
WormQTL | gene | WBGene00013980 | |||||||
WormFlux | gene | WBGene00013980 | |||||||
NDB | locus_tag | CELE_ZK507.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00013980|UniProtKB=P34636 | |||||||
family | PTHR35015 | ||||||||
NCBI | gene | 191338 | |||||||
RefSeq | protein | NM_066616.6 | |||||||
SwissProt | UniProtAcc | P34636 | |||||||
TREEFAM | TREEFAM_ID | TF315672 | |||||||
UniProt_GCRP | UniProtAcc | P34636 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 24 Jan 2008 10:42:49 | WBPerson2970 | Name_change | CGC_name | dos-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | dos | ||||||||
Allele (42) | |||||||||
Strain | WBStrain00032542 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00043626 | ||||||||
00043627 | |||||||||
00043628 | |||||||||
Ortholog (22) | |||||||||
Paralog | WBGene00003887 | Caenorhabditis elegans | From_analysis | Panther | |||||
WBGene00003891 | Caenorhabditis elegans | From_analysis (2) | |||||||
WBGene00019331 | Caenorhabditis elegans | From_analysis (2) | |||||||
WBGene00019640 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Structured_description | Concise_description | dos-1 encodes an unfamilar protein with no clear orthologs outside of nematodes; DOS-1 is paralogous to OSM-7, K02F3.7, and ZK507.4, has a predicted signal sequence with 12 conserved cysteine residues, and may be secreted; DOS-1 has no obvious function in mass RNAi assays. | Paper_evidence | WBPaper00028499 | |||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 29 Mar 2008 00:00:00 | ||||||||
Automated_description | Predicted to enable Notch binding activity. Predicted to be involved in positive regulation of Notch signaling pathway. Predicted to be located in extracellular space. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | ZK507.4 | |||||||
Corresponding_CDS_history | ZK507.4:wp144 | ||||||||
Corresponding_transcript | ZK507.4.1 | ||||||||
Other_sequence | CJC05627_1 | ||||||||
Associated_feature | WBsf645462 | ||||||||
WBsf659386 | |||||||||
WBsf993572 | |||||||||
WBsf225519 | |||||||||
WBsf225520 | |||||||||
Experimental_info | RNAi_result | WBRNAi00059466 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00006362 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00022036 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00088838 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1020576 | ||||||||
Expr1162889 | |||||||||
Expr2011032 | |||||||||
Expr2029269 | |||||||||
Drives_construct | WBCnstr00029398 | ||||||||
Construct_product | WBCnstr00029398 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (156) | |||||||||
Interaction | WBInteraction000235998 | ||||||||
WBInteraction000334941 | |||||||||
Map_info | Map | III | Position | 0.16456 | Error | 0.000331 | |||
Positive | Positive_clone | ZK507 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00032102 | ||||||||
WBPaper00038400 | |||||||||
WBPaper00040714 | |||||||||
WBPaper00065331 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |