WormBase Tree Display for Gene: WBGene00013847
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| WBGene00013847 | SMap | S_parent | Sequence | ZC84 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | cls-3 | Person_evidence | WBPerson534 | |||||
| WBPerson283 | |||||||||
| Sequence_name | ZC84.3 | ||||||||
| Molecular_name | ZC84.3 | ||||||||
| ZC84.3.1 | |||||||||
| CE43505 | |||||||||
| Other_name | CELE_ZC84.3 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | cls-3 | ||||||||
| DB_info | Database | AceView | gene | 3K276 | |||||
| WormQTL | gene | WBGene00013847 | |||||||
| WormFlux | gene | WBGene00013847 | |||||||
| NDB | locus_tag | CELE_ZC84.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013847|UniProtKB=Q03609 | |||||||
| family | PTHR21567 | ||||||||
| NCBI | gene | 176298 | |||||||
| RefSeq | protein | NM_001392172.1 | |||||||
| SwissProt | UniProtAcc | Q03609 | |||||||
| TREEFAM | TREEFAM_ID | TF101155 | |||||||
| UniProt_GCRP | UniProtAcc | Q03609 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 21 Jun 2010 10:25:58 | WBPerson2970 | Name_change | CGC_name | cls-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cls | ||||||||
| Allele | WBVar00094395 | Inferred_automatically | From strain object: RB2448 | ||||||
| WBVar01500260 | |||||||||
| WBVar00215419 | |||||||||
| WBVar00142076 | |||||||||
| WBVar00849044 | |||||||||
| WBVar00849045 | |||||||||
| WBVar00849046 | |||||||||
| WBVar00070343 | |||||||||
| WBVar00849047 | |||||||||
| WBVar00849048 | |||||||||
| WBVar00849049 | |||||||||
| WBVar00070348 | |||||||||
| WBVar00849050 | |||||||||
| WBVar00849051 | |||||||||
| WBVar00849052 | |||||||||
| WBVar00849053 | |||||||||
| WBVar00849054 | |||||||||
| WBVar00849055 | |||||||||
| WBVar00849056 | |||||||||
| WBVar00849057 | |||||||||
| WBVar00849058 | |||||||||
| WBVar00849059 | |||||||||
| WBVar00849060 | |||||||||
| WBVar00849061 | |||||||||
| WBVar00849062 | |||||||||
| WBVar00849063 | |||||||||
| WBVar00849064 | |||||||||
| WBVar00849065 | |||||||||
| WBVar00849066 | |||||||||
| WBVar00849067 | |||||||||
| WBVar01629235 | |||||||||
| WBVar01629236 | |||||||||
| WBVar01629237 | |||||||||
| WBVar01629238 | |||||||||
| WBVar01499774 | |||||||||
| WBVar02132483 | |||||||||
| WBVar02132484 | |||||||||
| WBVar02050850 | |||||||||
| WBVar02132485 | |||||||||
| WBVar00404836 | |||||||||
| WBVar00404837 | |||||||||
| WBVar00404838 | |||||||||
| WBVar00404839 | |||||||||
| WBVar00404840 | |||||||||
| WBVar00404841 | |||||||||
| WBVar00404842 | |||||||||
| WBVar00604042 | |||||||||
| WBVar01541924 | |||||||||
| WBVar01607194 | |||||||||
| WBVar02069650 | |||||||||
| WBVar01893639 | |||||||||
| Strain | WBStrain00033123 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Ortholog (39) | |||||||||
| Paralog | WBGene00000491 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00000549 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00015580 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable microtubule binding activity. Involved in astral microtubule organization and establishment of mitotic spindle localization. Predicted to be located in basal cortex; kinetochore; and microtubule cytoskeleton. Expressed in neurons and pharyngeal gland cell. Is an ortholog of human CLASP2 (cytoplasmic linker associated protein 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed (2) | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZC84.3 | |||||||
| Corresponding_CDS_history | ZC84.3:wp200 | ||||||||
| Corresponding_transcript | ZC84.3.1 | ||||||||
| Other_sequence | CBC17725_1 | ||||||||
| Associated_feature | WBsf651343 | ||||||||
| WBsf655466 | |||||||||
| WBsf667245 | |||||||||
| WBsf227255 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00006060 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00073423 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00080603 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021762 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00038105 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00000349 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00059026 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr25 | ||||||||
| Expr1020086 | |||||||||
| Expr1036190 | |||||||||
| Expr1162456 | |||||||||
| Expr2010254 | |||||||||
| Expr2028496 | |||||||||
| Drives_construct | WBCnstr00029507 | ||||||||
| Construct_product | WBCnstr00029507 | ||||||||
| Antibody | WBAntibody00002343 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (204) | |||||||||
| Interaction (14) | |||||||||
| Map_info | Map | III | Position | 0.306499 | Error | 0.009162 | |||
| Positive | Positive_clone | ZC84 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00041121 | |||||||||
| WBPaper00045213 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
