WormBase Tree Display for Gene: WBGene00013796
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| WBGene00013796 | SMap | S_parent | Sequence | Y116A8C | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y116A8C.19 | |||||||
| Molecular_name | Y116A8C.19 | ||||||||
| Y116A8C.19.1 | |||||||||
| CE23328 | |||||||||
| Other_name | CELE_Y116A8C.19 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | Y116A8C.19 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (26) | |||||||||
| Strain | WBStrain00037055 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00099643 | ||||||||
| 00099644 | |||||||||
| 00099645 | |||||||||
| 00120571 | |||||||||
| 00120572 | |||||||||
| Ortholog (53) | |||||||||
| Paralog (20) | |||||||||
| Structured_description | Concise_description | Y116A8C.19 encodes a CCCH tandem zinc finger (TZF) protein; based upon its sequence similarity to C. elegans POS-1, the product of Y116A8C.19 is predicted to function as an RNA-binding protein. | Paper_evidence | WBPaper00029068 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 18 Sep 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable mRNA 3'-UTR binding activity. Predicted to be located in cytosol. Expressed in head muscle; intestine; and ventral nerve cord. Human ortholog(s) of this gene implicated in breast cancer. Is an ortholog of human ZFP36 (ZFP36 ring finger protein); ZFP36L1 (ZFP36 ring finger protein like 1); and ZFP36L2 (ZFP36 ring finger protein like 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:1612 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12862) | ||||
| EFO:MONDO:0014769 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1108) | ||||||
| Molecular_info | Corresponding_CDS | Y116A8C.19 | |||||||
| Corresponding_transcript | Y116A8C.19.1 | ||||||||
| Associated_feature | WBsf978711 | ||||||||
| WBsf998959 | |||||||||
| Transcription_factor | WBTranscriptionFactor001087 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00036603 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00055436 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019919 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr7707 | ||||||||
| Expr1019834 | |||||||||
| Expr1036175 | |||||||||
| Expr1158948 | |||||||||
| Expr2007043 | |||||||||
| Expr2025270 | |||||||||
| Drives_construct | WBCnstr00012852 | ||||||||
| WBCnstr00029523 | |||||||||
| Construct_product | WBCnstr00017976 | ||||||||
| WBCnstr00021766 | |||||||||
| WBCnstr00029523 | |||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (123) | |||||||||
| Interaction (58) | |||||||||
| Map_info | Positive | Positive_clone | Y116A8C | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 16.0539 | |||||||
| Method | Gene |
