WormBase Tree Display for Gene: WBGene00013673
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| WBGene00013673 | SMap | S_parent | Sequence | Y105E8A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y105E8A.13 | |||||||
| Molecular_name | Y105E8A.13a | ||||||||
| Y105E8A.13a.1 | |||||||||
| CE45784 | |||||||||
| Y105E8A.13b | |||||||||
| CE45754 | |||||||||
| Y105E8A.13b.1 | |||||||||
| Other_name | Y105E8E.q | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y105E8A.13 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | Y105E8A.13 | ||||||||
| DB_info | Database | AceView | gene | 1P54 | |||||
| WormQTL | gene | WBGene00013673 | |||||||
| WormFlux | gene | WBGene00013673 | |||||||
| NDB | locus_tag | CELE_Y105E8A.13 | |||||||
| NCBI | gene | 260217 | |||||||
| RefSeq | protein | NM_001265432.2 | |||||||
| NM_001265433.3 | |||||||||
| TrEMBL | UniProtAcc | E8MDW2 | |||||||
| E8MDW1 | |||||||||
| UniProt_GCRP | UniProtAcc | E8MDW1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (79) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (21) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ADE sheath cell; anterior ganglion; anterior hypodermis; arc ant V; and mechanosensory neurons based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by fourteen chemicals including methylmercury hydroxide; 1-methylnicotinamide; and rotenone based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y105E8A.13a | |||||||
| Y105E8A.13b | |||||||||
| Corresponding_CDS_history | Y105E8A.13:wp191 | ||||||||
| Y105E8A.13:wp223 | |||||||||
| Corresponding_transcript | Y105E8A.13a.1 | ||||||||
| Y105E8A.13b.1 | |||||||||
| Other_sequence | MJ00902 | ||||||||
| ACC06280_1 | |||||||||
| Hbac_isotig06114 | |||||||||
| Dviv_isotig28479 | |||||||||
| FC550672.1 | |||||||||
| FK803359.1 | |||||||||
| EX552531.1 | |||||||||
| ACC14296_1 | |||||||||
| FK806499.1 | |||||||||
| Associated_feature | WBsf649761 | ||||||||
| WBsf986162 | |||||||||
| WBsf986163 | |||||||||
| WBsf1011248 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00055216 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00003932 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028900 | ||||||||
| Expr1158751 | |||||||||
| Expr2006965 | |||||||||
| Expr2025187 | |||||||||
| Microarray_results | SMD_Y105E8C.G | ||||||||
| 176047_at | |||||||||
| GPL14144_Y105E8A.13_1-60_0.836_31_C | |||||||||
| GPL14144_Y105E8A.13_137-196_0.852_24_B | |||||||||
| GPL14144_Y105E8A.13_600-659_0.954_3_A | |||||||||
| GPL19516_CGZ0041860 | |||||||||
| GPL19516_CGZ0041861 | |||||||||
| GPL21109_Y105E8A.13a | |||||||||
| GPL8673_Y105E8A_13P00699 | |||||||||
| Expression_cluster (129) | |||||||||
| Map_info | Positive | Positive_clone | Y105E8A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 25.7108 | |||||||
| Method | Gene |
