WormBase Tree Display for Gene: WBGene00013673
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WBGene00013673 | SMap | S_parent | Sequence | Y105E8A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | Y105E8A.13 | |||||||
Molecular_name | Y105E8A.13a | ||||||||
Y105E8A.13a.1 | |||||||||
CE45784 | |||||||||
Y105E8A.13b | |||||||||
CE45754 | |||||||||
Y105E8A.13b.1 | |||||||||
Other_name | Y105E8E.q | Curator_confirmed | WBPerson1983 | ||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
CELE_Y105E8A.13 | Accession_evidence | NDB | BX284601 | ||||||
Public_name | Y105E8A.13 | ||||||||
DB_info | Database | AceView | gene | 1P54 | |||||
WormQTL | gene | WBGene00013673 | |||||||
WormFlux | gene | WBGene00013673 | |||||||
NDB | locus_tag | CELE_Y105E8A.13 | |||||||
NCBI | gene | 260217 | |||||||
RefSeq | protein | NM_001265432.2 | |||||||
NM_001265433.3 | |||||||||
TrEMBL | UniProtAcc | E8MDW2 | |||||||
E8MDW1 | |||||||||
UniProt_GCRP | UniProtAcc | E8MDW1 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (79) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (21) | |||||||||
Structured_description | Automated_description | Enriched in several structures, including ADE sheath cell; anterior ganglion; anterior hypodermis; arc ant V; and mechanosensory neurons based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by fourteen chemicals including methylmercury hydroxide; 1-methylnicotinamide; and rotenone based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y105E8A.13a | |||||||
Y105E8A.13b | |||||||||
Corresponding_CDS_history (2) | |||||||||
Corresponding_transcript | Y105E8A.13a.1 | ||||||||
Y105E8A.13b.1 | |||||||||
Other_sequence | MJ00902 | ||||||||
ACC06280_1 | |||||||||
Hbac_isotig06114 | |||||||||
Dviv_isotig28479 | |||||||||
FC550672.1 | |||||||||
FK803359.1 | |||||||||
EX552531.1 | |||||||||
ACC14296_1 | |||||||||
FK806499.1 | |||||||||
Associated_feature | WBsf649761 | ||||||||
WBsf986162 | |||||||||
WBsf986163 | |||||||||
WBsf1011248 | |||||||||
Experimental_info | RNAi_result | WBRNAi00055216 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00003932 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1028900 | ||||||||
Expr1158751 | |||||||||
Expr2006965 | |||||||||
Expr2025187 | |||||||||
Microarray_results | SMD_Y105E8C.G | ||||||||
176047_at | |||||||||
GPL14144_Y105E8A.13_1-60_0.836_31_C | |||||||||
GPL14144_Y105E8A.13_137-196_0.852_24_B | |||||||||
GPL14144_Y105E8A.13_600-659_0.954_3_A | |||||||||
GPL19516_CGZ0041860 | |||||||||
GPL19516_CGZ0041861 | |||||||||
GPL21109_Y105E8A.13a | |||||||||
GPL8673_Y105E8A_13P00699 | |||||||||
Expression_cluster (129) | |||||||||
Map_info | Positive | Positive_clone | Y105E8A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | I | 25.7108 | |||||||
Method | Gene |