WormBase Tree Display for Gene: WBGene00013550
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WBGene00013550 | SMap | S_parent | Sequence | Y75B8A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | gex-4 | Person_evidence | WBPerson6609 | |||||
WBPerson1816 | |||||||||
Sequence_name | Y75B8A.14 | ||||||||
Molecular_name | Y75B8A.14 | ||||||||
Y75B8A.14.1 | |||||||||
CE23026 | |||||||||
Other_name | CELE_Y75B8A.14 | Accession_evidence | NDB | BX284603 | |||||
Public_name | gex-4 | ||||||||
DB_info | Database | AceView | gene | 3N306 | |||||
WormQTL | gene | WBGene00013550 | |||||||
WormFlux | gene | WBGene00013550 | |||||||
NDB | locus_tag | CELE_Y75B8A.14 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00013550|UniProtKB=Q9XW68 | |||||||
family | PTHR21231 | ||||||||
NCBI | gene | 176649 | |||||||
RefSeq | protein | NM_067186.4 | |||||||
TREEFAM | TREEFAM_ID | TF105810 | |||||||
TrEMBL | UniProtAcc | Q9XW68 | |||||||
UniProt_GCRP | UniProtAcc | Q9XW68 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 05 May 2023 12:43:53 | WBPerson51134 | Name_change | CGC_name | gex-4 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | gex | ||||||||
Allele (54) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00103156 | ||||||||
00103157 | |||||||||
00103158 | |||||||||
00103159 | |||||||||
00103160 | |||||||||
00103161 | |||||||||
Contained_in_operon | CEOP3888 | ||||||||
Ortholog (37) | |||||||||
Paralog | WBGene00001661 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00015029 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to enable GTPase activity. Is an ortholog of human GPN3 (GPN-loop GTPase 3). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y75B8A.14 | |||||||
Corresponding_transcript | Y75B8A.14.1 | ||||||||
Other_sequence (55) | |||||||||
Associated_feature | WBsf651529 | ||||||||
WBsf227642 | |||||||||
Experimental_info | RNAi_result | WBRNAi00037841 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00002670 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00058441 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1018137 | ||||||||
Expr1036052 | |||||||||
Expr1161860 | |||||||||
Expr2008409 | |||||||||
Expr2026650 | |||||||||
Drives_construct | WBCnstr00029599 | ||||||||
Construct_product | WBCnstr00029599 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (83) | |||||||||
Interaction (35) | |||||||||
Map_info | Map | III | Position | 16.1275 | |||||
Positive | Positive_clone | Y75B8A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00041771 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00061547 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |