WormBase Tree Display for Gene: WBGene00013447
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| WBGene00013447 | SMap | S_parent | Sequence | Y66D12A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nars-2 | Person_evidence | WBPerson10953 | |||||
| WBPerson36 | |||||||||
| Sequence_name | Y66D12A.23 | ||||||||
| Molecular_name | Y66D12A.23 | ||||||||
| Y66D12A.23.1 | |||||||||
| CE46243 | |||||||||
| Y66D12A.23.2 | |||||||||
| Other_name | nrs-2 | ||||||||
| CELE_Y66D12A.23 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | nars-2 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 28 May 2010 15:24:57 | WBPerson2970 | Name_change | CGC_name | nars-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nars | ||||||||
| Allele (333) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Contained_in_operon | CEOP3854 | ||||||||
| CEOP3724 | |||||||||
| Ortholog (40) | |||||||||
| Paralog | WBGene00001095 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00003815 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00001094 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00002238 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable asparagine-tRNA ligase activity. Predicted to be involved in asparaginyl-tRNA aminoacylation. Predicted to be located in mitochondrion. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 94 and combined oxidative phosphorylation deficiency 24. Is an ortholog of human NARS2 (asparaginyl-tRNA synthetase 2, mitochondrial). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0111641 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:26274) | ||||
| DOID:0111485 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:26274) | ||||||
| Molecular_info | Corresponding_CDS | Y66D12A.23 | |||||||
| Corresponding_CDS_history | Y66D12A.23:wp227 | ||||||||
| Corresponding_transcript | Y66D12A.23.1 | ||||||||
| Y66D12A.23.2 | |||||||||
| Other_sequence (29) | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00057947 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1017819 | ||||||||
| Expr1036012 | |||||||||
| Expr1161376 | |||||||||
| Expr2013859 | |||||||||
| Expr2032099 | |||||||||
| Drives_construct | WBCnstr00037845 | ||||||||
| Construct_product | WBCnstr00037845 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (70) | |||||||||
| Interaction (37) | |||||||||
| Map_info | Map | III | Position | 10.1651 | Error | 0.095744 | |||
| Positive | Positive_clone | Y66D12A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
