WormBase Tree Display for Gene: WBGene00013382
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| WBGene00013382 | SMap | S_parent | Sequence | Y62E10A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | gcl-1 | Person_evidence | WBPerson222 | |||||
| Sequence_name | Y62E10A.16 | ||||||||
| Molecular_name | Y62E10A.16 | ||||||||
| Y62E10A.16.1 | |||||||||
| CE24540 | |||||||||
| Other_name | CELE_Y62E10A.16 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | gcl-1 | ||||||||
| DB_info | Database | AceView | gene | 4O170 | |||||
| WormQTL | gene | WBGene00013382 | |||||||
| WormFlux | gene | WBGene00013382 | |||||||
| NDB | locus_tag | CELE_Y62E10A.16 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013382|UniProtKB=Q9U1W5 | |||||||
| family | PTHR23231 | ||||||||
| NCBI | gene | 190457 | |||||||
| RefSeq | protein | NM_070184.5 | |||||||
| TREEFAM | TREEFAM_ID | TF316048 | |||||||
| TrEMBL | UniProtAcc | Q9U1W5 | |||||||
| UniProt_GCRP | UniProtAcc | Q9U1W5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 08 Nov 2004 14:15:06 | WBPerson2970 | Name_change | CGC_name | gcl-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gcl | ||||||||
| Allele (88) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00098464 | ||||||||
| 00098465 | |||||||||
| 00120266 | |||||||||
| Contained_in_operon | CEOP4601 | ||||||||
| Ortholog (65) | |||||||||
| Structured_description | Automated_description | Enables identical protein binding activity. Predicted to be involved in germ cell development. Is an ortholog of human GMCL1 (germ cell-less 1, spermatogenesis associated) and GMCL2 (germ cell-less 2, spermatogenesis associated). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y62E10A.16 | |||||||
| Corresponding_transcript | Y62E10A.16.1 | ||||||||
| Other_sequence | JI470408.1 | ||||||||
| Acan_isotig11108 | |||||||||
| JI459383.1 | |||||||||
| JI475863.1 | |||||||||
| JI479043.1 | |||||||||
| Associated_feature | WBsf652342 | ||||||||
| WBsf231129 | |||||||||
| WBsf231130 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00037672 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00057848 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021222 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1016136 | ||||||||
| Expr1035979 | |||||||||
| Expr1161280 | |||||||||
| Expr2011966 | |||||||||
| Expr2030203 | |||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (78) | |||||||||
| Interaction (113) | |||||||||
| Map_info | Map | IV | Position | 8.89986 | Error | 0.069633 | |||
| Positive | Positive_clone | Y62E10A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4914 | |||||||
| 4585 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
