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WormBase Tree Display for Gene: WBGene00013382

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Name Class

WBGene00013382SMapS_parentSequenceY62E10A
IdentityVersion2
NameCGC_namegcl-1Person_evidenceWBPerson222
Sequence_nameY62E10A.16
Molecular_nameY62E10A.16
Y62E10A.16.1
CE24540
Other_nameCELE_Y62E10A.16Accession_evidenceNDBBX284604
Public_namegcl-1
DB_infoDatabaseAceViewgene4O170
WormQTLgeneWBGene00013382
WormFluxgeneWBGene00013382
NDBlocus_tagCELE_Y62E10A.16
PanthergeneCAEEL|WormBase=WBGene00013382|UniProtKB=Q9U1W5
familyPTHR23231
NCBIgene190457
RefSeqproteinNM_070184.5
TREEFAMTREEFAM_IDTF316048
TrEMBLUniProtAccQ9U1W5
UniProt_GCRPUniProtAccQ9U1W5
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:54WBPerson1971EventImportedInitial conversion from CDS class of WS125
208 Nov 2004 14:15:06WBPerson2970Name_changeCGC_namegcl-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classgcl
Allele (88)
RNASeq_FPKM (74)
GO_annotation00098464
00098465
00120266
Contained_in_operonCEOP4601
OrthologWBGene00062773Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00074175Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00024958Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00140454Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00144819Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00107562Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00130210Caenorhabditis japonicaFrom_analysisOMA
WormBase-Compara
WBGene00227216Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g8723Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g13290Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g13701Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g13878Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g7014Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g5249Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g14459Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g888Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g3528Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g9951Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00032.g1830Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-gcl-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold589.g5028Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00422.g11151Caenorhabditis sinicaFrom_analysisWormBase-Compara
GCK72_014550Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g03049Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_40132400Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIV_pilon.g12299Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00242461Onchocerca volvulusFrom_analysisWormBase-Compara
FB:FBgn0005695Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-030131-865Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:23843Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:19717Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:1345156Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:1919097Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
MGI:3709265Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:3709183Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:3709282Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:3709280Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:3709278Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:3709274Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:3709272Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:3780946Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:3780952Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
MGI:3780968Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
MGI:3780997Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
MGI:3781040Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:3781091Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:3781105Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:3781111Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:3781142Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:3781877Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:3781882Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
MGI:3781925Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
MGI:3781937Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:5439401Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:5434719Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:5434802Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:5434963Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:5435000Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:5439402Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:5435012Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:5435036Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:5435054Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:1565657Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:1549693Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
RGD:1359265Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
Structured_descriptionAutomated_descriptionEnables identical protein binding activity. Predicted to be involved in germ cell development. Is an ortholog of human GMCL1 (germ cell-less 1, spermatogenesis associated) and GMCL2 (germ cell-less 2, spermatogenesis associated).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY62E10A.16
Corresponding_transcriptY62E10A.16.1
Other_sequenceJI470408.1
Acan_isotig11108
JI459383.1
JI475863.1
JI479043.1
Associated_featureWBsf652342
WBsf231129
WBsf231130
Experimental_infoRNAi_resultWBRNAi00037672Inferred_automaticallyRNAi_primary
WBRNAi00057848Inferred_automaticallyRNAi_primary
WBRNAi00021222Inferred_automaticallyRNAi_primary
Expr_patternExpr1016136
Expr1035979
Expr1161280
Expr2011966
Expr2030203
Microarray_results (17)
Expression_cluster (78)
Interaction (113)
Map_infoMapIVPosition8.89986Error0.069633
PositivePositive_cloneY62E10AInferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point4914
4585
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene