WormBase Tree Display for Gene: WBGene00013315

WBGene00013315 SMap: S_parent: Sequence: Y57G11C
  Identity: Version: 1
    Name: Sequence_name: Y57G11C.20
      Molecular_name: Y57G11C.20
        Y57G11C.20.1
        CE14964
      Other_name: CELE_Y57G11C.20 Accession_evidence: NDB BX284604
      Public_name: Y57G11C.20
    DB_info: Database: AceView gene 4P607
        WormQTL gene WBGene00013315
        WormFlux gene WBGene00013315
        NDB locus_tag CELE_Y57G11C.20
        NCBI gene 353433
        RefSeq protein NM_070398.1
        TREEFAM TREEFAM_ID TF322297
        TrEMBL UniProtAcc O18244
        UniProt_GCRP UniProtAcc O18244
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (49)
    Strain: WBStrain00002331
      WBStrain00032318
    RNASeq_FPKM (74)
    Ortholog (53)
    Paralog: WBGene00019592 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
    Structured_description: Automated_description: Expressed in intestine. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y57G11C.20
    Corresponding_transcript: Y57G11C.20.1
  Experimental_info: RNAi_result: WBRNAi00037600 Inferred_automatically: RNAi_primary
      WBRNAi00016933 Inferred_automatically: RNAi_primary
      WBRNAi00021141 Inferred_automatically: RNAi_primary
      WBRNAi00037602 Inferred_automatically: RNAi_primary
      WBRNAi00097989 Inferred_automatically: RNAi_primary
      WBRNAi00057692 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram1458
      Chronogram1687
      Expr7079
      Expr1035941
      Expr1161104
      Expr2008053
      Expr2026292
    Drives_construct: WBCnstr00003000
      WBCnstr00004495
    Microarray_results (12)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_upregulated
      WBPaper00037682:sma-2_upregulated
      WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
      WBPaper00042194:nhr-114(RNAi)_downregulated
      WBPaper00044316:CH3HgCl_7.5uM_upregulated
      WBPaper00045774:clk-1_upregulated
      WBPaper00048923:Aging_regulated
      WBPaper00048971:daf-16(mgDf50)_downregulated_L1
      WBPaper00048988:neuron_expressed
      WBPaper00049545:jmjd-3.1(+)_upregulated
      WBPaper00050163:chd-3(eh4);let-418(RNAi)_upregulated_100-cell-embryo
      WBPaper00050163:chd-3(eh4)_upregulated_100-cell-embryo
      WBPaper00050163:let-418(RNAi)_upregulated_100-cell-embryo
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050903:mir-35-41(nDf50)_25C_upregulated
      WBPaper00054758:alg-1(gk204)_upregulated
      WBPaper00055334:DLC-1_interacting
      WBPaper00055354:Rifampicin_upregulated
      WBPaper00056443:sek-1(km4)_upregulated
      WBPaper00056826:hmc_biased
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00059027:neuron-synapses_depleted
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00061081:E.faecalis_upregulated_N2
      WBPaper00061340:ASE_parent
      WBPaper00061527:fbxa-35-Y39A3A.3
      WBPaper00061902:camt-1(ok515)_regulated_RMG
      WBPaper00062103:neuron_enriched
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062345:bortezomib_4h_upregulated_zip-1(jy13)
      WBPaper00062520:qui-1(db104)_downregulated
      WBPaper00062585:hlh-26(ok1453)_downregulated_E.faecium
      WBPaper00064130:Beta-Amyloid_24h_downregulated_mRNA
      WBPaper00064509:static-magnetic-field_upregulated
      WBPaper00064661:lpd-3(ok2138)_upregulated
      WBPaper00065005:sams-3(RNAi)_upregulated
      WBPaper00065158:AFD_enriched
      WBPaper00065841:6_2
      WBPaper00065841:6_3
      WBPaper00065841:10_0
      WBPaper00065841:14_0
      WBPaper00065841:28_0
      WBPaper00065841:103_0
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066110:Doxorubicin_upregulated_diploid
      cgc4489_group_12
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00030839:Larval_A_Class
      WBPaper00031003:0hr_muscle_depleted
      WBPaper00031003:total_muscle_depleted
      WBPaper00035227:heat_shock_regulated
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-exposed_3h
      WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_48h
      WBPaper00041960:N2_fasting_upregulated_anytime
      WBPaper00046853:AOBr_LakeStobenseeAug_upregulated
      WBPaper00048989:N2_rapamycin_downregulated
      WBPaper00053236:Starvation_regulated_N2
    Interaction: WBInteraction000267177
      WBInteraction000272470
      WBInteraction000272471
  Map_info: Positive: Positive_clone: Y57G11C Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV 12.5529
  Method: Gene