WormBase Tree Display for Gene: WBGene00013268
expand all nodes | collapse all nodes | view schema
| WBGene00013268 | SMap | S_parent | Sequence | Y57A10A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | tric-1B.2 | |||||||
| Sequence_name | Y57A10A.28 | ||||||||
| Molecular_name | Y57A10A.28 | ||||||||
| Y57A10A.28.1 | |||||||||
| CE35686 | |||||||||
| Other_name | CELE_Y57A10A.28 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | tric-1B.2 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 05 Apr 2017 11:17:23 | WBPerson2970 | Name_change | CGC_name | tric-1B.2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tric | ||||||||
| Allele (61) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Contained_in_operon | CEOP2597 | ||||||||
| Ortholog (37) | |||||||||
| Paralog | WBGene00013255 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable identical protein binding activity and potassium channel activity. Predicted to be involved in potassium ion transmembrane transport. Predicted to be located in endoplasmic reticulum membrane. Human ortholog(s) of this gene implicated in osteogenesis imperfecta type 14. Is an ortholog of human TMEM38B (transmembrane protein 38B). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0110343 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:25535) | ||||
| Molecular_info | Corresponding_CDS | Y57A10A.28 | |||||||
| Corresponding_CDS_history | Y57A10A.28:wp109 | ||||||||
| Corresponding_transcript | Y57A10A.28.1 | ||||||||
| Other_sequence (15) | |||||||||
| Associated_feature | WBsf224051 | ||||||||
| WBsf224052 | |||||||||
| WBsf224053 | |||||||||
| WBsf224054 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00057630 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00021087 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037567 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014515 | ||||||||
| Expr1035922 | |||||||||
| Expr1161040 | |||||||||
| Expr2017496 | |||||||||
| Expr2035635 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (70) | |||||||||
| Map_info | Map | II | Position | 7.50784 | |||||
| Positive | Positive_clone | Y57A10A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00050284 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
